| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2714 |
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| Symbol | |
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| ID | 7270822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2845599 |
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| End bp | 2846441 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643571306 |
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| Product | tRNA pseudouridine synthase ACD |
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| Protein accession | YP_002467701 |
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| Protein GI | 219853269 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.971768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.823422 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCTGG CATTCCAGCT CTCGTACGAC GGGAACCAGT TCCGGGGGTC CCAGCTCCAA
CCTGCCTACC GGACGGTTGA GGGGGAGCTT ATCACCGCCT GTCAGCGGGT CCAGCTCTTC
GATGATCCTT GCAAGGCAGG GTTCGCCCTG GCTGGCAGGA CCGACCGGGG TGTGCACGCC
CGGGGCCAGG TCGGTGCCTT CTCAACACCG TTCCCCGAGC GGGCGGTGGA GGCGCTCAAC
GGGCAGCTCT CACCCGACCT ATGGTGTAAC GGGTTCGCCG AAGTGCCTCC CTCGTTCCAC
CCGCGCTTCG ATGCCATATC ACGCACATAC CGCTACTTCT TTGCCGACTG GCCCCTCGAT
ATCAGAGCGA TGGATCAGGC CGCAGCGGCC CTGATCGGGA CTCACGACTT CTCACGACTC
GCACGGGTGA GGGAGAAGAG CCCGATCCGG ACCGTCAAGT CGGCCCGGGT TTTCCAGGAC
AGAGGGATAC CGGTCTTTGA AGTGACCGCC CACACCTATC TCTGGCACAT GGTCAGGTGC
ATGGCGGCGG CGCTCCTCCT GATCGGAACC CACGAACGGG AGCCAGAACT GATGGAGCGG
CTCCTCTCTG GGAAATGCAG AAGAAACCCG CCGGCAGCCC CGGCTGATGG ATTGGTGCTC
TGGGACGTGG ACTGTGGGGT CACCTTCACC CCGACTGAAC CCGACCCACG GAGCAGGGAC
TGGATTGGTT CGGCCAGGCG GGAGGCGATG GTCCGGGAAC GGATCATTGG CCTCCTAGAC
CGGAGTGGCG TTGACCGACG GGGGAAGGAG CCGGGCGATG ATAGCGGACG GGACCTGCTC
TGA
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| Protein sequence | MRLAFQLSYD GNQFRGSQLQ PAYRTVEGEL ITACQRVQLF DDPCKAGFAL AGRTDRGVHA
RGQVGAFSTP FPERAVEALN GQLSPDLWCN GFAEVPPSFH PRFDAISRTY RYFFADWPLD
IRAMDQAAAA LIGTHDFSRL ARVREKSPIR TVKSARVFQD RGIPVFEVTA HTYLWHMVRC
MAAALLLIGT HEREPELMER LLSGKCRRNP PAAPADGLVL WDVDCGVTFT PTEPDPRSRD
WIGSARREAM VRERIIGLLD RSGVDRRGKE PGDDSGRDLL
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