Gene Mpal_2528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2528 
Symbol 
ID7271697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2659815 
End bp2660453 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content62% 
IMG OID643571123 
ProductRNase P subunit p30 
Protein accessionYP_002467524 
Protein GI219853092 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1603] RNase P/RNase MRP subunit p30 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.801364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTGCA CTGACATCTG TACCTGTTCG TATCCGGCAG GAGACTCCTC CCTGACCAGA 
ATGACGATGG AGGCCGGAGC TCTCGGCTTT GACACCATCG TGCTGCCCGT GGAGCAGCCG
GCAGTCATCG GGAATGTCAG TGTGCTGCCG GCACGGGTGA TCGAGACACG GCATGTCCGT
GAGGTGATCA GGGACCTCGG GCGTACGAAA GAGGGTCAGG TTATGATCGT CATGGCCGGG
GATGCCTCGT TCATCAGGGG TGTGGTCCCG CTCCGCGGGG TCCACCTGCT GGCTGGGGTC
GAGCGACAGC GGAAGAACGC CTTCGACCAT GTCTCCGCCC GGCTCGCCGC TGAGAAGAAT
GTGGGGGTTA CAATCGACCT CTTTCCCCTG CTGTATCTGA AGGGGCTGCA GCGGCAGCGC
GTGCTGCAGC GGTACGCCGA CCTGCTGACC CTGCACCGAC GATATGAGTT CCCATTTGTG
ATCGGATCGT TCGCACGCTC GATCCTCGAT CAGCGATCGG TCAGGGAGAT GACCCTGCTC
TGTGCCCTCT TTGGGATGGA GAAGGAAGAG GTCATCAGGG GACTCACCTC GCTGCCAGGG
GTACTGCACC AGCTGCTGCC AGTCAGGGTG GTCGAATGA
 
Protein sequence
MHCTDICTCS YPAGDSSLTR MTMEAGALGF DTIVLPVEQP AVIGNVSVLP ARVIETRHVR 
EVIRDLGRTK EGQVMIVMAG DASFIRGVVP LRGVHLLAGV ERQRKNAFDH VSARLAAEKN
VGVTIDLFPL LYLKGLQRQR VLQRYADLLT LHRRYEFPFV IGSFARSILD QRSVREMTLL
CALFGMEKEE VIRGLTSLPG VLHQLLPVRV VE