| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2319 |
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| Symbol | carB |
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| ID | 7270580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2465458 |
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| End bp | 2468628 |
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| Gene Length | 3171 bp |
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| Protein Length | 1056 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643570924 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_002467327 |
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| Protein GI | 219852895 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGGC GTACTGATAT CAAGAAGGTT CTCTTGATCG GTTCCGGACC AATCCAGATC
GGACAGGCCG CTGAGTTCGA CTTCTCAGGT TCACAAGCCT GCAAGTCCCT CCGCGAAGAA
GGGATTGAGG TGGTACTGGT CAACTCCAAC CCGGCGACGA TCCAAACCGA TCCCGAAACG
GCTGACACGA TCTATATCGA ACCCCTGAGG GCCTCGATCA TCGCAAAGAT CATCGAAAAA
GAGAAACCCG ATGGGATTCT TTCGGGGATG GGCGGACAGA CCGGTCTGAA CCTGACCGCA
GAACTGGCAG AGCTCGGAGC CCTCCGAAAT GTCGAAATTC TTGGCACCCC GCTCGAGGCG
ATCTACCAGG GAGAGGACCG AGAGAAGTTC AAGGCCCTGA TGCAGAAGAT AGGAGAACCG
GTCCCGAGAA GCATGATCTT AAACCGGCTC GACCAGCTTG GCGAGGTGAT CGAAAAGGTC
GGACTGCCAG TGATCATCAG GCCGGCCTAC ACCCTCGGGG GCGCCGGTGG CGGTATCGCC
CATACCGTCG ACGAACTCAA ACGGATCGTC GAAATTGGCC TGCAGCGCTC ACGGATCCAC
CAGGTACTGA TCGAAGAGAG CGTGATGGGC TGGAAGGAAC TCGAGTTCGA AGTGATGCGC
GATGCGAAAG ACACCTGTGT GATCATCTGC TCGATGGAGA ATGTGGACCC TATGGGGGTT
CACACAGGGG AGAGCGTGGT CGTCGCCCCG ATTCTGACGT TGCGGGACGA CGAATACCAG
ATGATGCGGT CGGCTTCGAT CAAGATCATA AGGGCGCTCG ATGTGCAGGG AGGGTGTAAC
ATTCAGTTCG CCTTTCAGGA CGGCGACTAC CGTGTGATCG AGGTAAACCC CCGGGTCTCT
CGTTCATCTG CCCTCGCCTC CAAGGCGACC GGGTATCCGA TCGCGCGAGT TGCGGCCAAG
ATCGCCATCG GCATGCACCT CGATGAGATC ACCAATGCCG TCACCGGATG CACACCGGCT
TCGTTCGAGC CGTCGATCGA TTATGTGGTC GTCAAGGTCC CGCGCTGGCC GTTCGACAAG
TTCACGAGGG CCGACCGGAC CCTAACGACG GCGATGAAGT CCACCGGCGA GGTGATGGCC
ATCGGCCGGA CCCTCGAGGA AGGATTTAAG AAGGCGCTCC GTTCGATCGA CACCGATATC
AACACCCATA CCAACCACAA CGAGATCAGG ATGATCCTGA CCAGCCCGAC CGATGAACGA
TTCGGGTGCA TCTTTGACGC GTTCAGGGAG GGGTTCACGG TGGACGAGAT CGCATCCCTC
ACCTCGATCA ATCCGTTCTT CCTTCACAAG ATGGAGAATA TCGTGAAGAT CGAGCGAACT
CTCGCGACCG AGCCGACCGA TCTCAGGATC CAGGAGGCCG CTGCCGCCGG GTTCTCGATG
AAGGAGATCG CAGAACTGAC CGGTCGACCG GTCGATGAGG TTCGAACCGC CGCCGGCGAT
CCGGTCTACA AGATGGTCGA CACCTGTGCA GCCGAGTTCC CGGCCACGAC TCCGTACTAC
TACTCGACCC ACGGGGTGAC CACCGATATC ATCCAGAACG ATAAGAAGAA GGTGCTGATC
CTCGGGTCAG GGCCGATCCG GATTGGACAG GGGATCGAAT TCGATTACTG TACCGTCCAT
GCCGTTAAGG CCCTACGGGA GGAGGGGGTC GAGGTCCATA TCGTCAACAA CAACCCCGAG
ACCGTCTCAA CTGACTTCGA CACCTCGGAC CAGCTCTTCT TTGAACCGAT GCAACTCGAG
GATGTCGTGA ACATCCTTAA AACGGACGAT TACTTTGGAG TGATGGTGCA GTTCGGAGGA
CAGAACGCTG TCAATCTGGC CCTGCCGCTG CTGCAGGAGA TCAAAAAACT CGGCCTCCCA
ACCGCGATCC TGGGCTCGTC CCCGGACGCA ATGGATATCG CCGAGGACCG GGACCGGTTC
AGCGAACTGC TGGACGCCCT CAAGATTCCA TCGCCGCCGA ACAGTTCGGC CTACTCTGAG
GAGGCCGCAC TGGCCATGGC CAATAAGATC GGCTTCCCGG TGCTGGTCCG CCCCAGTTAC
GTACTCGGCG GGAGGGCGAT GGAGATCGTC CACGACAATT TCGAACTCGA GTCGTACATG
AAGGAAGCAA TGCGGGTGAG CAAAAGCCAC CCAGTACTGA TCGATTCGTT CCTGCAGGAG
GCCATCGAGC TGGACGTGGA CGCGGTCTGC GACGGCGACG AGGTGCTGAT CGGCGGGATC
ATGGAGCATA TCGAGGAGGC TGGGGTTCAT TCGGGCGATT CGGCCTGTGT GATCCCGACC
CAGTCCCTCT CCGATTCGGT GCTTGCCCGG GTCAGGGAGT ATACCAAGAA GATCGCCATG
GGGCTCGGCG TTGTGGGGCT CGTAAACATT CAGCTGGCTG TCAAGGACGA CATCGTTTAT
GTGCTTGAGG CCAACCCCCG AGCATCCCGT ACGGTCCCCT TCGTTTCCAA GGCAACCGGG
ATCCCGCTGG CCAAGGTGGC CGCGAAGGTG ATGATCGGAA AGAAACTGAA GGACCTCGGG
TATAAGGAGC GCACGTTCCG GCATGTGGCG GTGAAGGAGG TGCTTCTCCC ATTCAATAAA
CTCCCCGGGG TTGACACCGT CCTCGGTCCA GAGATGAAAT CCACCGGCGA GGTGATGGGG
ATCGACTACG ACTTCGGCAG GGCCTACTAC AAAGCCTGCA TATCAGCGGA CAACGAACTC
CCGATCGAAG GGAACGTCTT CATCTCGGTC TCGACTGAGC AGAAGGAGGA GGTCCGAAGG
ATCGCAGCTC AGCTCCGGGA CCTCGGGCTG ACCCTCTTTG GAACGAAAGG GACCGTCGAG
ACGCTGATGC AGGCTGGGAT CGAGGCGAAC CTGGTCAGAA AGGTCCAGGA AGGATCCCCG
AATGTGATCG ATATGGTGCG TAAGGGTGAG ATCAGGCTGA TCATCAACAC CCCGGTGGAC
AAGCAGTCCC GGCTCGACCA TTACCAGATC ATGCGAGCGG CCGTCGACTA CGGGATCCCG
TACATCACGA CCCTGCAGGC AGCCCGGGCA GCTGCGCTGG CCATCGATGC GATCAAGCGG
GAGAAGATCA CGCTGGAACC AATCAGCCAT TATCTTTCAG AGGTTGAATG A
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| Protein sequence | MPRRTDIKKV LLIGSGPIQI GQAAEFDFSG SQACKSLREE GIEVVLVNSN PATIQTDPET
ADTIYIEPLR ASIIAKIIEK EKPDGILSGM GGQTGLNLTA ELAELGALRN VEILGTPLEA
IYQGEDREKF KALMQKIGEP VPRSMILNRL DQLGEVIEKV GLPVIIRPAY TLGGAGGGIA
HTVDELKRIV EIGLQRSRIH QVLIEESVMG WKELEFEVMR DAKDTCVIIC SMENVDPMGV
HTGESVVVAP ILTLRDDEYQ MMRSASIKII RALDVQGGCN IQFAFQDGDY RVIEVNPRVS
RSSALASKAT GYPIARVAAK IAIGMHLDEI TNAVTGCTPA SFEPSIDYVV VKVPRWPFDK
FTRADRTLTT AMKSTGEVMA IGRTLEEGFK KALRSIDTDI NTHTNHNEIR MILTSPTDER
FGCIFDAFRE GFTVDEIASL TSINPFFLHK MENIVKIERT LATEPTDLRI QEAAAAGFSM
KEIAELTGRP VDEVRTAAGD PVYKMVDTCA AEFPATTPYY YSTHGVTTDI IQNDKKKVLI
LGSGPIRIGQ GIEFDYCTVH AVKALREEGV EVHIVNNNPE TVSTDFDTSD QLFFEPMQLE
DVVNILKTDD YFGVMVQFGG QNAVNLALPL LQEIKKLGLP TAILGSSPDA MDIAEDRDRF
SELLDALKIP SPPNSSAYSE EAALAMANKI GFPVLVRPSY VLGGRAMEIV HDNFELESYM
KEAMRVSKSH PVLIDSFLQE AIELDVDAVC DGDEVLIGGI MEHIEEAGVH SGDSACVIPT
QSLSDSVLAR VREYTKKIAM GLGVVGLVNI QLAVKDDIVY VLEANPRASR TVPFVSKATG
IPLAKVAAKV MIGKKLKDLG YKERTFRHVA VKEVLLPFNK LPGVDTVLGP EMKSTGEVMG
IDYDFGRAYY KACISADNEL PIEGNVFISV STEQKEEVRR IAAQLRDLGL TLFGTKGTVE
TLMQAGIEAN LVRKVQEGSP NVIDMVRKGE IRLIINTPVD KQSRLDHYQI MRAAVDYGIP
YITTLQAARA AALAIDAIKR EKITLEPISH YLSEVE
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