Gene Mpal_2318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2318 
Symbol 
ID7270579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2464403 
End bp2465458 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content55% 
IMG OID643570923 
Productcarbamoyl-phosphate synthase, small subunit 
Protein accessionYP_002467326 
Protein GI219852894 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0505] Carbamoylphosphate synthase small subunit 
TIGRFAM ID[TIGR01368] carbamoyl-phosphate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGG TTCTGGGGCT TGAAGACGGG ACATATGTGG TAGGAGAAGG CTTCGGAGCA 
GAGGGCACCT GCGCCGGCGA ACTGGTTTTC TCCACCCAGA TGACCGGGTA TATGGAGGCG
CTGACGGATG CCAGTTATGC CGGCCAGATC CTGATGTTCA CGTTCCCACA GATCGGGAAC
TACGGGGTCG ATGAGAAGAA CTTCCAGAGT CCGGCAGTGC AGACGCTCGG CTGTGTAACG
CAGGAGATCT GCGACAAGCC GGCAACAGGA CAGTCTCTGA AGCGATACTA CGAAGAGCAC
GGTCTTTTCG GGATTGAAGG AGTTGACACC AGGGCGCTGA CGATTATAAC CAGACAGCAC
GGAACACTCA GGGCTGCACT GATCGTCGGA AGTGGAGACC ATGAACATGC GATCGCTCTG
GCACGGGCCG TACCTCCAAT CTCAAACCAG GCTCTGATCC CACGGGTCTC CTGCAAAGAG
GCATACAGGG TTCCTGGTCC AGGAAGGAAG ATTGCGGTGA TCGATCTCGG GATCAAACGG
CATATGGTCA TCAGCCTGAA TAAACGGGGT GCTGATCTCG GGATATTCCC ATACAACACA
ACTGCTGAGG AGATCGAGGC CTTTGAACCC GATGCACTGC TCATCTCCAA CGGACCAGGG
GATCCAATGC AGGCCAGGGA TGCGATCAAG ACCGTCTCAT ACCTGATCGG GACCATGCCA
GTCTTTGGGA TCTGCATGGG AAATCAGGTG ACCGCGCTGG CGCTGGGAGC TGAGACCCAT
AAACTGAAGT TCGGTCATCG TGGCACCAAT CAGCCGGTAA GGTACCTGGA TGGGAGGATT
TTTATCACCA CCCAGAACCA CGGCTTCGTC GTAGACCAGG AGTCCCTCCC TGAGGGGTGT
ACCTGTAGTT ATACCAATTT AAACGACGGA ACCCTAGAAG GGTTTGAATC CTCAGACCTA
GAAATCTCCT GCGTTCAATT CCATCCCGAG GCCCATGGCG GTCCCCGGGA TACAGAGAGT
CACTTTTTTG ATATGATTAT GCGGAGGATA GCCTGA
 
Protein sequence
MKAVLGLEDG TYVVGEGFGA EGTCAGELVF STQMTGYMEA LTDASYAGQI LMFTFPQIGN 
YGVDEKNFQS PAVQTLGCVT QEICDKPATG QSLKRYYEEH GLFGIEGVDT RALTIITRQH
GTLRAALIVG SGDHEHAIAL ARAVPPISNQ ALIPRVSCKE AYRVPGPGRK IAVIDLGIKR
HMVISLNKRG ADLGIFPYNT TAEEIEAFEP DALLISNGPG DPMQARDAIK TVSYLIGTMP
VFGICMGNQV TALALGAETH KLKFGHRGTN QPVRYLDGRI FITTQNHGFV VDQESLPEGC
TCSYTNLNDG TLEGFESSDL EISCVQFHPE AHGGPRDTES HFFDMIMRRI A