| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2229 |
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| Symbol | |
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| ID | 7272526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2379615 |
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| End bp | 2380547 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643570841 |
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| Product | cobalamin biosynthesis protein CobD |
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| Protein accession | YP_002467245 |
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| Protein GI | 219852813 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0406571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACTCT CACCGGCAGG GGTAACCCTT CTGGTGCTGG TAGGGTCCCT GCTGGTGGAC
CGGGTCATCG GGGATCCCCA TTCCCGATTT CATCCTGTCG CCCTCCTCGG CATGTTCATC
GGGCTCTGGA GTCGGCCTGA ACGCTGGCCA GTTCGTGCAC AGCGAAGTAT CGGGCTCCTC
CTCACCCTGT TGACGGCCAC GCTCTTCGCC CTGCCGTTCT GGCTCTTCTC GAACTATGCT
CCGCTTGTGC TCTACCTGGT GGCGGGTCCG TTTCTGCTCA AGTCCTGTTT TGCCTGGCGC
TCGCTGGAGG AGCATGCGGC CGCGGTGGTG ACGGCCGTGG AGTCTGACCT TGGTTCAGGT
CGGCACGAGG TGCAACGGCT GGTCTCCCGG AACACAGCAG CATTGGACGG GGAGCATATT
CTCTCGGCGG CCTACGAATC GGTGGCTGAG AATCTGGTTG ACAGCATCAT TGCCCCCCTT
CTCTTCTTTC TGGTCTTTGG ACTGACCGGT GCGGCGGTCT ACCGGGCGGT CAATACGATG
GATGCGATGC TCGGGTACCG AGACGAACGC GAACGGCTCG GCTGGGCGCC GGCCAGGCTC
GACGACCTGC TCAGTTATAT CCCGGCCAGA GTCACCGGTC TGCTCCTGCT CTTGATCTTT
ACTCTCCAGG GGCGGGGATG GGCGGCCTGG CAGGTGTTTA TTCGGGATCG GAAGAAGCGG
CCCGGGTTCA ACGGGGGGAT CCCGATGTCC CTGATCGCCG GCGGAACGGG GGTGCTTTTT
GAGAAACCCG GGGTTTACCG GATCGGGGAG GCCGAAGGAT CGCTCTCAAA ACGGGGAGTA
CTGGTCATCT TGACGGTCAG GGAGGCTACG CTCCTGCTGG TAATCCTTGC CGGGTGCACA
CTCTTTTTAT TGCGTGGTCT CTCCTATAGA TAG
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| Protein sequence | MVLSPAGVTL LVLVGSLLVD RVIGDPHSRF HPVALLGMFI GLWSRPERWP VRAQRSIGLL
LTLLTATLFA LPFWLFSNYA PLVLYLVAGP FLLKSCFAWR SLEEHAAAVV TAVESDLGSG
RHEVQRLVSR NTAALDGEHI LSAAYESVAE NLVDSIIAPL LFFLVFGLTG AAVYRAVNTM
DAMLGYRDER ERLGWAPARL DDLLSYIPAR VTGLLLLLIF TLQGRGWAAW QVFIRDRKKR
PGFNGGIPMS LIAGGTGVLF EKPGVYRIGE AEGSLSKRGV LVILTVREAT LLLVILAGCT
LFLLRGLSYR
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