Gene Mpal_2196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2196 
Symbol 
ID7270281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2336388 
End bp2337476 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content61% 
IMG OID643570810 
ProductDNA topoisomerase VI subunit A 
Protein accessionYP_002467215 
Protein GI219852783 
COG category[L] Replication, recombination and repair 
COG ID[COG1697] DNA topoisomerase VI, subunit A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAGG AAGCGCTCGA TGCGCAGGCA CGGCAGGAAC TGCTCAGGAT AGCAGAGGCC 
TGGTATGACC AGATGGTTGG CGGGGTGGTT CCGTCCATCT CGCTGCCGAC TAGGACCAAG
CAGAACCTCG CCTTCGACGA GACGAGCGAG GTCTGGAAGT ATGGAGAACG GGAATCCCTT
CGATCGGCTC ACTCAGCCAA GAGTGCGCTG CATCTGCTGA AGATGTCGTA TGTGATCGGA
TTTCTCAAGC AGCAACTGAT CGAGAACCGG TCGTCGACCT TGAGAGAGAT GTATTACATC
TCCGAGGGGT GGAAAAAGGC GAAATTCCAT GCGCAGGACG AGAGCAACCT GCTGATCGAG
GATCTCGAGA TCCTGACGAT GCTGCAGCGG GAGGCGTTCC ATCTCCGGCC TGAGGAGGAC
GGGGCGACGG TCTTCGGGCC GATCCGCCTC AAAGAGATGA CCCGGCGGGG GGTCAAGGAG
ATCCACTGCC AGGAGGATGT CGGCGAAGCC GGGTACGCGA TCCCGAACAA TGTCGAGAAT
CTGGAGTTCG TCGACCATGA CGCGAAGTTC GTCATCGCCA TCGAGACCGG TGGTATGTAT
GCCCGGCTGC AGGAGAACGG GTTCGACGAG GAGTACGGGG CGGTGCTGGT CCATCTGAAG
GGGCAGCCGG CCCGGTCGAC CCGGCGGGTG CTGCACATGA TCCATGAGAA GTTCAAGCTC
CCGATCACTG TCTTCACCGA CGGCGACCCC TGGTCGTACC GGATCTACGC CTCGGTGGCC
TACGGTTCGA TCAAGAGTGC GCACATGTCT GAGTTGCTGG CAACCCCCCA GGCGCAGTTC
ATCGGGGTTC AGCCGAGCGA TATCAGCGAT TACGATCTCC CATCCGACAC GCTCTCCGAG
CGGGACGTGC TGGCCCTGAA GTCGGAGCTG AGCGATCCCC GGTTCGACAC CGAGTACTGG
CGGTACCAGA TCGGCCGGCA GTTGGAGATA GGGATCAAGT CAGAACAGCA GGCCTTCGCG
GCCCGCGGGC TCGACTACGT GACGAAGGAG TACCTGCCGG CACGGTTGAG CGAGATGGGG
GTGTTGTGA
 
Protein sequence
MSKEALDAQA RQELLRIAEA WYDQMVGGVV PSISLPTRTK QNLAFDETSE VWKYGERESL 
RSAHSAKSAL HLLKMSYVIG FLKQQLIENR SSTLREMYYI SEGWKKAKFH AQDESNLLIE
DLEILTMLQR EAFHLRPEED GATVFGPIRL KEMTRRGVKE IHCQEDVGEA GYAIPNNVEN
LEFVDHDAKF VIAIETGGMY ARLQENGFDE EYGAVLVHLK GQPARSTRRV LHMIHEKFKL
PITVFTDGDP WSYRIYASVA YGSIKSAHMS ELLATPQAQF IGVQPSDISD YDLPSDTLSE
RDVLALKSEL SDPRFDTEYW RYQIGRQLEI GIKSEQQAFA ARGLDYVTKE YLPARLSEMG
VL