| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2147 |
|---|
| Symbol | |
|---|
| ID | 7271199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2281175 |
|---|
| End bp | 2281990 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643570761 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002467168 |
|---|
| Protein GI | 219852736 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGATGA AAAAGATCCC TCTGGTGATC CTGTTCTCTC TGCTTCTGAT CGGGACCGCC
TCAGCATACC TGGTCAATGT GGATGCACCG TCCACGCTGA CCAAGGGCGA TGTTCTGACC
GCCAACGCGA CCAGTAACTT CCCGGCCGGA ATAAGGCTCG ATGTTGCCCT CTTCTCTCCT
TACTCAGGCA ACCAGTACCA GAAGAACACC GTGATCGTCC AGCAGAACGG ACAGTTCAAC
ACCACCTTCC AGACCACCGA TCTCCTGACT GGGAACTACA AGGTCGAGGT GCTTGAGAAT
ACCGACTATC CGATCGGTTC CAGCGCTGTG GTCAGGAAGA TTGTCACCAT CGTCGATCGT
TCAGGTGAAG CCACCGTGAC CGCACCGCTC TCGCAGGCTT TCAACGGTAG CCTGATCGTC
TCCGGAACGG CGAAGAATCT GAAGACAGCC TCCATCATCG TCACCGTGAC CAGCCAGGGC
AGCACCATCT ACGGGCCGCA ATATATCCTG ACCGATGAGA AGGGCGGCTT CCAGACGCTG
GTTCCGATCC CGGCCGCAGG CGCCTACACC CTGGTCCTCG CCGACAACGC AGGTACGATC
TCCCAGACTG CGATCACTGC AACCAATGGA ACAACACCGG TACAGACCAC TGTTTCGGTG
AATGGGACTG CCAGCAGCGC TGTCACCACC GTGACATCCG CGGTTAATAA TTCGTCCACC
GTTGCGGCCA CCATCCCGGC GACCACTCAG AAATCTCCGC TTCCCTGGGC GCTCGCCCTC
CTTGGGGTCG GGCTGCTGGC GCTACGCAGA CATTAA
|
|---|
| Protein sequence | MMMKKIPLVI LFSLLLIGTA SAYLVNVDAP STLTKGDVLT ANATSNFPAG IRLDVALFSP
YSGNQYQKNT VIVQQNGQFN TTFQTTDLLT GNYKVEVLEN TDYPIGSSAV VRKIVTIVDR
SGEATVTAPL SQAFNGSLIV SGTAKNLKTA SIIVTVTSQG STIYGPQYIL TDEKGGFQTL
VPIPAAGAYT LVLADNAGTI SQTAITATNG TTPVQTTVSV NGTASSAVTT VTSAVNNSST
VAATIPATTQ KSPLPWALAL LGVGLLALRR H
|
|---|
| |