Gene Mpal_2141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2141 
Symbol 
ID7271621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2275409 
End bp2276578 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content61% 
IMG OID643570755 
Productindolepyruvate ferredoxin oxidoreductase alpha and beta subunits-like protein 
Protein accessionYP_002467162 
Protein GI219852730 
COG category[C] Energy production and conversion 
COG ID[COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.390235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCA CCGGTACCGA AGTACTGGCC GAAGCAATCA GAGTGGCGGC AGATCGATGC 
TATGCGGTAC CAGGGTACCC AATCACTGAC CTGGCCCGCC TTGCCAGGGC TGAACTGGTG
ATCAATGAGA AGGTCGGCCT CGAGAAGGCG CTCGGAGACT CGCTCTCCTC CAGGCGGGCC
TGCATGATCC TCAAACATAT CGGGCTGAAC GCCTGCGCCG ATCCACTGAT CGAGGCCACC
ACCCAGGGGC TTAAGGCCGG TGTTGTGGTG ATCGTCGGCG ACGACCCGAC TGCAGTCCAG
TCACAAAACG GACAGGACTC CCGCCACTAT CGTGACCTGG CCGGCGTCCC GGTGATCACC
CTCGATATGA AGGCTGTCAG CGAAGGGATC GAAGCGGCGT TCAGAGCATC TGCATCTTTT
TCTAGAATAG TGCTGGTCAG GGTCACGCCG GATCAACTTG CCGGCGAGGC ATCGACTGGA
ACGGTTTGCC GGGGGCAGGA GACCGGGAGT CTGGCACCCA CAGACCGGAC CTATTTTGGC
CGGATGGTGA GGGCGGCTGA ACAGCACCCC CAGATAGTGG CCTGGGCCGA CCGGTGCAGA
ACGGCAGGAA CCTTCACCGA CGCAGCCCTC CCGACAGCAC CGATGCTACC GGAGAGGGCG
GTAGAGACCC AGCAGAAGCG GGGCTCCTCC ACAACCTTCT GCAGCGACTG CCCGTTTCAC
CTGCTCTTCT CAATGCTCCT TGCCGGGGAT CGGCAGGTGA TCTGTGACAC CGGATGTGCA
CTCCTGGCCC AGAACCCCCC ATACTCCCTC GGATGGGGTT CGTACGGTCT TGGCTCCTCG
ATCGCCGTCG CCTCGACGAG CACCGGGGTG GCCCTGACCG GCGACTATGC ACTCTTCCAC
AGCGGGATCA ACGCCCTTAT CGAGGCCTAT GAGAAGCGGT CACCCCTCCT CTGTATCGTG
CTCCAGAATC GGTGCATGGG GATGACCGGC CGACAGCAGA TCCCGGACCT GCTGAAGTAT
ATTACGTGGG CAGATCCGAT CATCATCTCA GCCGACGACC AGACCGGGCT CGAAGATGCC
CTTGCAGAGA CCAGACGCCC ATGTACCCTG GTGGTGCAGG GGGCTTGTAT AATTGGAGAG
ACCTATGTTT CCAGAACGAT GGAATGTTGA
 
Protein sequence
MIGTGTEVLA EAIRVAADRC YAVPGYPITD LARLARAELV INEKVGLEKA LGDSLSSRRA 
CMILKHIGLN ACADPLIEAT TQGLKAGVVV IVGDDPTAVQ SQNGQDSRHY RDLAGVPVIT
LDMKAVSEGI EAAFRASASF SRIVLVRVTP DQLAGEASTG TVCRGQETGS LAPTDRTYFG
RMVRAAEQHP QIVAWADRCR TAGTFTDAAL PTAPMLPERA VETQQKRGSS TTFCSDCPFH
LLFSMLLAGD RQVICDTGCA LLAQNPPYSL GWGSYGLGSS IAVASTSTGV ALTGDYALFH
SGINALIEAY EKRSPLLCIV LQNRCMGMTG RQQIPDLLKY ITWADPIIIS ADDQTGLEDA
LAETRRPCTL VVQGACIIGE TYVSRTMEC