Gene Mpal_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2020 
Symbol 
ID7272001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2142257 
End bp2142940 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content63% 
IMG OID643570634 
Producthypothetical protein 
Protein accessionYP_002467044 
Protein GI219852612 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.387128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.228475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGGGA AGAAGAGCCT CACGATCGGG ATCACGGTCA ATCTGGAGAA TTACGAGAAC 
CTGCGCCTCG AGGTGACCGG AGAGGTTGCC GACCAGCAGG AAGTGAAGGA TCTGGTCGGA
TTCCTCGACC AGACGCTCAC CAATTTTGGA AGAGGGAACC CTGCCACCAT TGCGCTGATC
GAGAAATACC GGGCCAGGGT TTTATCCACG GGGGACGGCT CAGCCTCCAC TCTAGAGCCG
GCCCTCTATT CCCAGGAACC TGAACCGGAG TGGCCTGAAA TGGAAGTGCC CGCCCCCTTG
CCCGTGCAGC AGCCCCTGAC GCCACCCGCA GAAGCGGCCC CGGCACCAAC TCCGACCCCG
GCCACTGAGC CGGCGGTGCC AGCGAAGGAA ACAACCAGAT CAAAGACGTT CCCGGCGCAG
AAGCCTGAAA AGCCAAAGAA AGAGGAGAAG CCTGCACCGG CGATTCAGCC TGAGCCCACA
CCAGTGGCTC CAACCCCGAC CCAGGCCCCC CCGGCGCCGG CGCCTGTTGC GGCACCGGTG
GCTGCGCCCA CGGCTCCATC ACAGGCTGCA CCATCCGGGG CCAGTTGTGA GATCTGCGGC
TGCGCGGTCA GCTCCTCTGA ACAGAAGATG TCGCAGCTCT TCATGAGCAG GACGCTCTGC
AAGGCCTGCA TGAAGACCGC ATGA
 
Protein sequence
MPGKKSLTIG ITVNLENYEN LRLEVTGEVA DQQEVKDLVG FLDQTLTNFG RGNPATIALI 
EKYRARVLST GDGSASTLEP ALYSQEPEPE WPEMEVPAPL PVQQPLTPPA EAAPAPTPTP
ATEPAVPAKE TTRSKTFPAQ KPEKPKKEEK PAPAIQPEPT PVAPTPTQAP PAPAPVAAPV
AAPTAPSQAA PSGASCEICG CAVSSSEQKM SQLFMSRTLC KACMKTA