Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2020 |
Symbol | |
ID | 7272001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 2142257 |
End bp | 2142940 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643570634 |
Product | hypothetical protein |
Protein accession | YP_002467044 |
Protein GI | 219852612 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.387128 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.228475 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGGGA AGAAGAGCCT CACGATCGGG ATCACGGTCA ATCTGGAGAA TTACGAGAAC CTGCGCCTCG AGGTGACCGG AGAGGTTGCC GACCAGCAGG AAGTGAAGGA TCTGGTCGGA TTCCTCGACC AGACGCTCAC CAATTTTGGA AGAGGGAACC CTGCCACCAT TGCGCTGATC GAGAAATACC GGGCCAGGGT TTTATCCACG GGGGACGGCT CAGCCTCCAC TCTAGAGCCG GCCCTCTATT CCCAGGAACC TGAACCGGAG TGGCCTGAAA TGGAAGTGCC CGCCCCCTTG CCCGTGCAGC AGCCCCTGAC GCCACCCGCA GAAGCGGCCC CGGCACCAAC TCCGACCCCG GCCACTGAGC CGGCGGTGCC AGCGAAGGAA ACAACCAGAT CAAAGACGTT CCCGGCGCAG AAGCCTGAAA AGCCAAAGAA AGAGGAGAAG CCTGCACCGG CGATTCAGCC TGAGCCCACA CCAGTGGCTC CAACCCCGAC CCAGGCCCCC CCGGCGCCGG CGCCTGTTGC GGCACCGGTG GCTGCGCCCA CGGCTCCATC ACAGGCTGCA CCATCCGGGG CCAGTTGTGA GATCTGCGGC TGCGCGGTCA GCTCCTCTGA ACAGAAGATG TCGCAGCTCT TCATGAGCAG GACGCTCTGC AAGGCCTGCA TGAAGACCGC ATGA
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Protein sequence | MPGKKSLTIG ITVNLENYEN LRLEVTGEVA DQQEVKDLVG FLDQTLTNFG RGNPATIALI EKYRARVLST GDGSASTLEP ALYSQEPEPE WPEMEVPAPL PVQQPLTPPA EAAPAPTPTP ATEPAVPAKE TTRSKTFPAQ KPEKPKKEEK PAPAIQPEPT PVAPTPTQAP PAPAPVAAPV AAPTAPSQAA PSGASCEICG CAVSSSEQKM SQLFMSRTLC KACMKTA
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