| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1983 |
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| Symbol | |
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| ID | 7270789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2111042 |
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| End bp | 2111470 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643570598 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002467009 |
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| Protein GI | 219852577 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.325796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGCCTG CCAGGATAGA GATACTGCTG ATCGTGATGC TCATCGGGGG CGTTGCGCTT
GCCGGGTGCA CTGCACAGAA GAGTTCAGAC ACTACCAGTG GTGCCGGTGG GGATGCGGCA
ACCATCTTCG CCCAGGCCGA CACCCTCGGC GAACAGGGGA ACTACCAGCA GGCCCTGACC
GCATACGACC AGGGACTGCA GATCGATCCA AACAACATCG AAGCGTTGAA CGGAAAAGGG
GCGACCCTCC GGGCACTCGG ACGCGATGAC GAGGCGCTGG CTGCATTCAC CCGGGCGACC
GAGGTCGATC CATCCTCTGC GCCGTCCTGG ATGAACAGGG GCGATGTACT CGAACGGCTC
GGCAGAACCA CCGAGGCGGA TGCGGCCTAC AAAAAGGCAA CAGACCTGGG CGGCACCGCC
CAGCAATGA
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| Protein sequence | MRPARIEILL IVMLIGGVAL AGCTAQKSSD TTSGAGGDAA TIFAQADTLG EQGNYQQALT
AYDQGLQIDP NNIEALNGKG ATLRALGRDD EALAAFTRAT EVDPSSAPSW MNRGDVLERL
GRTTEADAAY KKATDLGGTA QQ
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