Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1924 |
Symbol | |
ID | 7272741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 2041645 |
End bp | 2043123 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643570538 |
Product | putative anti-sigma regulatory factor, serine/threonine protein kinase |
Protein accession | YP_002466951 |
Protein GI | 219852519 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.184744 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGACCG ACGATCGTGA TCGCTGCCAG TTACAGGTTC CGGCAGAGCC GCAGTACCTG CCGATGGCCC TTCATCTGGT CAGCGATATC GCAGAACTTG CCGGGTTCGA TCAGCGTGAC CGGCAGCGGA TCGAGGTGGC CGTCGAGGAG GCGGTCTCCA ATGTGATCAC CCACGCCTAT CCGGAGGGGG GAGGAGTCTG CGGTCTGACG GGGGTCATCA CCCCGACCGG GCTGGAGATC CGGATCCATG ACACCGGTCT TCCGTTCGAT CCTGAACAGA TCCCCGACTT TCGACCGGAC CCGGACGGTA AGACCGCCTC GTCCGGGCTG GGCAGTCACC TGATCCGGCA CCTGATGGAT GAGATGGAGT TCTGTAACCT TGGGAACGGG GGGAAGGAGA CCCGTTTTGT CCGGTACCTG CCGCATGCCT CTATCTTTGA AGGAGCGGGG CACCCGGTGC AGACCGACGA TGTCGTCGTC ACCGACCCCG GGGAGATCGC GATACGGCTG ATGGATCCTG TGGAGGCGGT CGAGGTGGCC CGGTGTGTCT ACGATGCCTA CGGCTACTCG TACGTGTACG AGCATATCTA TTACCCGGAC CGTCTCCGGG CGATGAACCA TGAAGGTTCG CTCATCTCTG CGGTAGCGGT TACGGGAACC GGTGACGTGG CCGGGCATGT GGCGCTGGTC TTCGACCCGC TCGACCCGGG GTCTGCCGAG GTGGCGATCG CGGCCACGAA GTGCCGGTAC CGGGGTCATG CGGTCGTCCC CCGTCTGGTC ACGTTCCTTG AACAGGTGGG TCGGGAACAG GGACTGACCT GCCTCTTCAG CCAGCCGGTC ACCGCTCACA CGATCTCGCA GCATGTCTTC CACAAGCTCG GCTACCACAC CTCCGGGTTC CTGCTGGCCC ATGCGCCGGC CACCCTCTCC TTCCACCGGA TCGCAGAGGA TCTGGCGCAG CGTGAATCGG TTGCCATCGC CTGCAAGTAT CTGGTTTCAC CGGAGGCGGT CACCCTCTAT CCACCCTCAG TCCATGCCAG GATGGTCGGG GCGATCTGTG CTGATATCGG CCTTCCGGCA ACGATCGCAC CGGGTCAATT CCTCGATGAT GCCGTCAGAA CGGAACTGCA GAGCGTGATC AAGACCGGGA TGCTCGTAGC CTCCATCCAC TTCTCCCGGT TTGGTGCTGA TCTCTCCATG GCGGTCAGGC ATGAGGTGAT CCGGTTGAAG CGGGAGGGGG TGCAGGTGAT CGAGGCGAGT TTGGACCTCA GTGACCCTGC AGCAGCATCG GCTGCCGGTC TGCTCGAGGA TCTTGGATTC ATCTTCACCG GCATCATCCC GACCGGCGCC GGCGGCGCTC AGCTGCTGAT GCAGTACCTG AACGGGATCG TCATCGATTA CCAGGCCCTT CGACTCGAGT CCGACTTCTC GAAGGAACTG CTCGAGTACA TCCGGCTTCA CGATCCCCAG TCCGGATAG
|
Protein sequence | MKTDDRDRCQ LQVPAEPQYL PMALHLVSDI AELAGFDQRD RQRIEVAVEE AVSNVITHAY PEGGGVCGLT GVITPTGLEI RIHDTGLPFD PEQIPDFRPD PDGKTASSGL GSHLIRHLMD EMEFCNLGNG GKETRFVRYL PHASIFEGAG HPVQTDDVVV TDPGEIAIRL MDPVEAVEVA RCVYDAYGYS YVYEHIYYPD RLRAMNHEGS LISAVAVTGT GDVAGHVALV FDPLDPGSAE VAIAATKCRY RGHAVVPRLV TFLEQVGREQ GLTCLFSQPV TAHTISQHVF HKLGYHTSGF LLAHAPATLS FHRIAEDLAQ RESVAIACKY LVSPEAVTLY PPSVHARMVG AICADIGLPA TIAPGQFLDD AVRTELQSVI KTGMLVASIH FSRFGADLSM AVRHEVIRLK REGVQVIEAS LDLSDPAAAS AAGLLEDLGF IFTGIIPTGA GGAQLLMQYL NGIVIDYQAL RLESDFSKEL LEYIRLHDPQ SG
|
| |