Gene Mpal_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1889 
Symbol 
ID7272706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2003911 
End bp2004264 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content58% 
IMG OID643570504 
ProductProtein of unknown function DUF372 
Protein accessionYP_002466917 
Protein GI219852485 
COG category[S] Function unknown 
COG ID[COG2098] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.286212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACTG ATCGTGAACA GGCTGCCTTT GAGGCAGGGA TCAAACTCGG GGCGCTCTAT 
CACCAGTGGG TCGGTACCCC GATATCAGTG CAGACCGCTT CAGGCGTCGA AGCGGTGATC
GAGCAGAGCG TCGGACTCCA GCCCTTTGTG GAAGAGATCG ATGTCACCCT CGACCGATCG
CTGATGAATG CGAATGCGTT CGGGTACGCC GAACTCTCCG GCCTGATGTT CGATGTGACG
ATCAGGACGA AGGTCGGCGC CACCACCTGT GTTGCGGCCT TGAGACCGGA GAACGGGTAT
CCGTTGATGA GGATCGTGAG CTGTGATGAA GAAGAGCCCC TATCCGATCA CTGA
 
Protein sequence
MSTDREQAAF EAGIKLGALY HQWVGTPISV QTASGVEAVI EQSVGLQPFV EEIDVTLDRS 
LMNANAFGYA ELSGLMFDVT IRTKVGATTC VAALRPENGY PLMRIVSCDE EEPLSDH