| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1816 |
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| Symbol | |
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| ID | 7270362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1923179 |
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| End bp | 1923703 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643570431 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002466845 |
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| Protein GI | 219852413 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.706847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATGATA ACGATCTGGC ATCGGTCTGG GTCAGGCGTG GAGAAGAGAA TCTGAAGGAT
GGCAACTACA GGAAGGCAGC CTGGTGCTTT ACGAATGCGA TCGAGCGCGA ACCAGAGAAC
AGTCTGGCAT GGATGGGGAA GAGCAGATCC CTCAAACACC TCGGAAAAGA GGAGGAAGCG
CTCGCCTGCT ATGATCGAGC GATAAAGATC GGACCGCACA AGTTCGACAC CTGGCTTGAG
AAGGGATTTG GTCTGATCGA TCTCGATCAG CAGGAGGAGG CGATCTGGTG CTTTGAGATC
GCCCTGGAGA TCAATGCTAA AGACAGCACG GCATGGCTGA TGAAAGGGCT CTGCCTGAAG
GCACTCGATC GATCAGAGGA CGCATTGGAG GCGCTCGAAT ATTCCCTGGA CCTTGACCCA
CAGCGGGGCA CAACCTGGGC GGTGACCGGT GAGGTGATGG ATCTTCTCGA TCGACCGGAC
GAGGCGAGGA TCTGCAGGGA GACGGCGAAG AAGCTCGGCG TCTAG
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| Protein sequence | MNDNDLASVW VRRGEENLKD GNYRKAAWCF TNAIEREPEN SLAWMGKSRS LKHLGKEEEA
LACYDRAIKI GPHKFDTWLE KGFGLIDLDQ QEEAIWCFEI ALEINAKDST AWLMKGLCLK
ALDRSEDALE ALEYSLDLDP QRGTTWAVTG EVMDLLDRPD EARICRETAK KLGV
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