| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1795 |
|---|
| Symbol | |
|---|
| ID | 7270341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 1884787 |
|---|
| End bp | 1885872 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643570410 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002466824 |
|---|
| Protein GI | 219852392 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3291] FOG: PKD repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.242338 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAGAA GAGATGAGAA CGGACACGGT TGGTATCGCC AGAAGACACA GCCCCCAAAG
AGAAGGGGAG GAGGGCTCGC CCTTCTTCTC TTCCTGGGCA TCCTCCTCTT CATCCCCCCG
GGTGGAGCGG CCCCCATCGC CGACTATAAT AATGTCATGA TACACGTGGC CAATCCCGAA
GGCCCGGCCT ACAATGTCTT CGGAAACGGG TCCTACCTGA GCCGGTTCGA GGGGGTCGAC
CGCGGGCTCA ACGCCCTGCA CATCTCCACC GACCCTGCCG TGAACTTCGG CCAGGTGACG
ACGACCGCCA ACCAGTCAGG AACCTTCTAC GCCACCGACT CGGGCGGCAA GGGCTACGAG
GACGATATCC TCCTCCTCGT CGCCGTGAAC GGCACGATCC CCGACGACTT CAAACTCCAT
GTCACGGCCG ACGGCTACAC CTGGACCCCG AACCCCATCA GCAATACGGC CCCGACCTCC
TCCACCTACA ACGCCACCAC TCTCGACGAG ACCTTCACGA AAGCCGACCT CATCTACGGC
CCGCAGAACT GGAAACCGAC CGGCAACGGC TACTCCTATC CGATCTATTA CGGACAGGAC
ACGAACGACA CGACCAACAC CTTCCAGGTG ATGCTCATCG ATCTGAACGC CGGCGTGCTC
AGACCGAACG CAGCGCTCGA GAACCAGGGA GCCGTCAGGA TCCACTACTC GTTCGAGAAC
CTCTCCTCGT TCGCGGCCTT CAACGTCTAC GGCTACTGCA AGACCTCGAA CAACGGCTTC
GACATGATCG CCTGGACGAA CTCGCTGATG CCAGACCGGA CCCCAAGCGG CTACTCGGTC
ACGGCCTCGT CGCCGGTTTT GAAGATCCTT CCCCTCCCGG ATCAGCAGCA TGCCCCCCTG
GACCATGACG GCGACGGACG ATACGAAGAC CTGAACGGAA ACGGACAGGC CGACTTCTCA
GACGTGGTCC TCTTCTTCAA CCAGATGGAC TGGATCGCGG AGAATGAACC CGTCGACGCC
TTCGACTTCA ACAAGAACGG AAAGATCGAC TTCGGCGACG TGGTCTCCCT CTTCATCAGG
ATCTGA
|
|---|
| Protein sequence | MQRRDENGHG WYRQKTQPPK RRGGGLALLL FLGILLFIPP GGAAPIADYN NVMIHVANPE
GPAYNVFGNG SYLSRFEGVD RGLNALHIST DPAVNFGQVT TTANQSGTFY ATDSGGKGYE
DDILLLVAVN GTIPDDFKLH VTADGYTWTP NPISNTAPTS STYNATTLDE TFTKADLIYG
PQNWKPTGNG YSYPIYYGQD TNDTTNTFQV MLIDLNAGVL RPNAALENQG AVRIHYSFEN
LSSFAAFNVY GYCKTSNNGF DMIAWTNSLM PDRTPSGYSV TASSPVLKIL PLPDQQHAPL
DHDGDGRYED LNGNGQADFS DVVLFFNQMD WIAENEPVDA FDFNKNGKID FGDVVSLFIR
I
|
|---|
| |