| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1734 |
|---|
| Symbol | |
|---|
| ID | 7271298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 1805027 |
|---|
| End bp | 1806295 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643570348 |
|---|
| Product | dihydroorotase, multifunctional complex type |
|---|
| Protein accession | YP_002466764 |
|---|
| Protein GI | 219852332 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
|---|
| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.409452 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAGATC TCCTCCTATT AAACCTGACC CTTCCGGACG GAAGGGTTGT CGACCTGCAG
GTCCGGGACG GGATCGTCGT GCATGCAGGT GCCGGAGCTC CGGCTCATCA GACGCTCGAT
TGCAGGGGAC TGCTCGTCCT CCCGGCCGCG ATCGATATGC ATGTTCATAT GCGGGGCGGC
ACTCAGTCCG TCAAGGAGGA CTGGACCACC GGTTCGCAGA GCGCACTGGC CGGCGGGGTG
ACGGTGGTGG TCGACCAGCC GAACACTGTC CCGCCGATCA CCAACCGGGA ACATTTCAAA
GTCAGGGTCG CCGATGCCAC CGCCCATTCG TACTGCGGGT TCGGGGTGAA CGGGGCCGTG
ACCCGGGATG CGAGAATTGC GGACCTCTGG CAGGGCGGGG CGCTGGCGTT CGGCGAAGTC
TTCATCGCTC CGTCCAGTTA CGGGGAGGCC CTGACACTGG AGGTGCAGCA GCGCACCTTT
GCTGAGATCC ATCGGCTGGG GGGGCTCGTC ACCGTTCATG CTGAGGAGGT CTCCGGTACC
GCGCCGGTCG GGCTCCGCCA GCACAGTCTG CAGCGATCGC CGGCAGGGGA AGAGCGAGCT
GTACAGGCCC TGCGGGCATC GTGCGCACCC GGTCAGCGGG TCCACTGCTG CCACATGAGC
ACGGCAGGAT CGTTGGATGC AGCTCATCGG GCAGGGATGA CGGCCGAGGT GACTCCCCAT
CACCTCCTTC TCTCCATCGA ACGGTTCGCC GATACCGACA CTCACGGGCG TGTGAACCCA
CCGCTCAGGT CGGAACGTCT CCAGAGAGAA CTCTTTCTGG CCTGGGATCG GATCGACCTG
ATCGCTTCGG ACCATGCGCC GCACACATTG AACGAGAAGG CGCAGGCCTT TACGAATGCC
CCTTCCGGGC TGCCGGGCGT CGAGACGATG GTTCCGCTGT TGATGGCGCA TGTCCTCACC
AGCGAACTCT CTCTCGCTTC TGTCGTGCAG AAGACCGCTG TTGCACCGGC GAAAGTTCTG
GGAATCCCAC CGGCCGGGTT CTCACCCGGC GATCGTGCCG ACTTTGCGCT CTATCCCCGT
GAGGCGGTCC CTGTTGAGGC CGCCGACCTG CACAGCAGGT GTACCTGGAC ACCGTATCAA
GGGATGTTGG CGGTCTTTCC TGAACGGGTA ATCATGCGGG GAACGGTCGT CTATGACCAT
GGGGACTTCA CAAGGATCGA CCCCTGCTGG TACAGGGGGA GGGGTTATAT GGAGAGACCA
CAGATATGA
|
|---|
| Protein sequence | MLDLLLLNLT LPDGRVVDLQ VRDGIVVHAG AGAPAHQTLD CRGLLVLPAA IDMHVHMRGG
TQSVKEDWTT GSQSALAGGV TVVVDQPNTV PPITNREHFK VRVADATAHS YCGFGVNGAV
TRDARIADLW QGGALAFGEV FIAPSSYGEA LTLEVQQRTF AEIHRLGGLV TVHAEEVSGT
APVGLRQHSL QRSPAGEERA VQALRASCAP GQRVHCCHMS TAGSLDAAHR AGMTAEVTPH
HLLLSIERFA DTDTHGRVNP PLRSERLQRE LFLAWDRIDL IASDHAPHTL NEKAQAFTNA
PSGLPGVETM VPLLMAHVLT SELSLASVVQ KTAVAPAKVL GIPPAGFSPG DRADFALYPR
EAVPVEAADL HSRCTWTPYQ GMLAVFPERV IMRGTVVYDH GDFTRIDPCW YRGRGYMERP
QI
|
|---|
| |