Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1624 |
Symbol | |
ID | 7272166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 1670784 |
End bp | 1672358 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643570237 |
Product | beta-ribofuranosylaminobenzene 5'-phosphate synthase family |
Protein accession | YP_002466659 |
Protein GI | 219852227 |
COG category | [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1907] Predicted archaeal sugar kinases [COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) |
TIGRFAM ID | [TIGR00144] beta-RFAP synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.931737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.205569 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCCT CAAATCTCCT ATCGATGCTC AAGGAACTGG AACAGTCCAG CCCGGTCTCC CCCCTCCAGA AGATCCTTCT CCTCACGGAC GGATCGGTCA CCAATCTCCT CGAGGTGGTG GCCGGCGAGC CAATCGAGGT GCATACCCTC GCCCAGCAGG TGGTGCGAGC AGACCGCGAC GAGGCGGCGG ACCTGGGGAT CGAGGCCGGC GACCTGATCA ACTTCCGGGT TGTGGACCTG GTCGGTTCGG AGAGTACACG GACCTATGTC CACGCCATCT CTCACACCCC GCTCGATCGC CTCGGACCCG AGTTTCGGGA CGACCTGATG GCCGCCGATA TCCCGATCGG CAGGATACTC CAGCGGTACC ATATGGAGAC CAGGCGGGAG ATCCGGGATA TCCGCTCGAT CCGTGCCGAC AGAAACCTCT CCCGCACCTT CGATGCCCCG GCTGAGTCCG TCCTCTTCTC CCGGCGGTAC TGTATCGTTC ACGAGCAGCA GCCGCTGATC TTCATCGAGG AGATCTTCTC GCCGGCGCTC TGGGAAGGGG TCTGGATCTC CGGCCAGGTC GGCGCCGCGT TACCGACCCC AGCGGAGGAG CAGAGCATCC GGGTCGAGGC TCCGTCGCGG CTCCACCTGG GGCTGATCGA TATGCACGGC GGGCTCGGGC GGGTCGACGG CGGGATCGGG ATCACTCTGA TGAACCCCTG CACCGGCATC GAGGTGAAGA GGGGGGAGGA CCTCACCGTC ACGGGCGGTA CCCCCGAGGT CCACCGGCGG GTGCTCGAGG CAGCCAGGAA GGTGCTGAAT GCGGCTGGTA TCCGGGGTGG CGCCGCGATC ACGGTGAAGC GATCGATGCC GCAGCACACC GGCCTCGGGA GCGGGACCCA GCTCGCTCTG GCCACCGGGG CGGCCGTCTC CAGGCTCTAT AACCTGAACC TCTCTGTCAG GAGGATCGCG GCGATCGTGG GACGGGGCGG GACCTCGGGG ATCGGGACGG CGGCCTTCGG GCATGGGGGA TTCATCCTGG ATGGCGGGCA CAGCTTCGGC CCGCATGGTG AAAAGCACGG GTTTCAACCA TCGTCTGCGT CGACGGCGGT GACCCCTGCA ACGGTCTGCG CCCGGCTCTC CTTCCCGGAA GCCTGGAAGA TCGTCCTCGC GATCCCCAAT AAGGGGACGA ATGTCGAGGG TGCACAGGAG GTGAACATCT TCCGGGACTA CTGCCCGGTC CCGATCGAGG ACGTCCGGCA GATCTGCCAC GAGATCATGA CCCGCATGCT CCCCGGCATC GCTGAGGAGG ACCTGGGCCT CTTCGCCGAT TCAGTGAACG CGATCCAGAC CCTCGGGTTC AAGAAGGTGG AGACGAGCCT GCAGGATCCG GTGGTGCCGG CCCTGATCCG CGAACTCAGG CAGGCAGGGG CGGCGTGTGC CGGCCTCAGT TCCTTCGGCC CCACCGTCTA CGCGATCACC TATGGCGACC TCGCCGGCAT CACTCATGCA GCAACAGAGA CCTTCGGCGA GCAGGGTGGA GAGGTGATCG TCACCAGGGG CAGGAACCAT GGGGCGGTCT ATTGA
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Protein sequence | MSASNLLSML KELEQSSPVS PLQKILLLTD GSVTNLLEVV AGEPIEVHTL AQQVVRADRD EAADLGIEAG DLINFRVVDL VGSESTRTYV HAISHTPLDR LGPEFRDDLM AADIPIGRIL QRYHMETRRE IRDIRSIRAD RNLSRTFDAP AESVLFSRRY CIVHEQQPLI FIEEIFSPAL WEGVWISGQV GAALPTPAEE QSIRVEAPSR LHLGLIDMHG GLGRVDGGIG ITLMNPCTGI EVKRGEDLTV TGGTPEVHRR VLEAARKVLN AAGIRGGAAI TVKRSMPQHT GLGSGTQLAL ATGAAVSRLY NLNLSVRRIA AIVGRGGTSG IGTAAFGHGG FILDGGHSFG PHGEKHGFQP SSASTAVTPA TVCARLSFPE AWKIVLAIPN KGTNVEGAQE VNIFRDYCPV PIEDVRQICH EIMTRMLPGI AEEDLGLFAD SVNAIQTLGF KKVETSLQDP VVPALIRELR QAGAACAGLS SFGPTVYAIT YGDLAGITHA ATETFGEQGG EVIVTRGRNH GAVY
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