Gene Mpal_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1558 
Symbol 
ID7271103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1607133 
End bp1607909 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content61% 
IMG OID643570172 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_002466594 
Protein GI219852162 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAAGG AAACAGAGCT GATTGCAGCC GGTCAACTGG CCCCCTGCTG GAGCGATCCC 
GATCGGACAC TGCTCAAGGT CAGAAGAATG GCAGCAGAGG CAGCCGACGC TGGCGCCGTC
CTGCTCGCCC TACCTGAGCA GGTACTGACT GGCTGGAATC CGCTGCAGGC TCAGTTCCTT
GAAGAGGAGG ACGGGCCACT CGTCGGTGCC CTCCAGGAGA TCGCAGCAGA TCATCGGATC
GGGCTCCTCG GCTCGGTACA GCAGAAGGCC GACCCGATGC CGACGAACAC AGCGGTCATG
ATCGATGCAG ACGGGACGGT GCTCACCAGG TATGCGAAGA TGCACCCGTT CTCCCCCGGG
GGGGAGGACC TCCACTATGC CAGAGGGGCT GGCATCAGCA CCTTCTCCAT GGCTGGACTT
CGTTTTGGGA TTGCGATCTG TTATGATCTC CGGTTCAGCG ATCTCTTCGC CCGGTACGCA
GAGGCCGGGG TCGACGCCAT GCTGGTCCCT GCAGCCTGGC CATGTTCCCG GATCGAGCAC
TGGGAACGTT TTCTCCGGAT GCGAGCCGAG GAGCAGGGGT ATTACCTGAT CGGAATCAAC
ACCGCTGCCG TAACCACACC GATCGACCGG TATTGCGGAC ATTCGATGAT CGTCGACCCG
TCCGGCACGG TGCTGGCCTC GGCGGATGGG ACTGAACAGG TGTTGTACGC AACAGTGAAT
CCCGCTATGG TCTGTTCTGC AGTGCAGCAC GACCGGCCAA CAACCAACGG AAGGTGA
 
Protein sequence
MTKETELIAA GQLAPCWSDP DRTLLKVRRM AAEAADAGAV LLALPEQVLT GWNPLQAQFL 
EEEDGPLVGA LQEIAADHRI GLLGSVQQKA DPMPTNTAVM IDADGTVLTR YAKMHPFSPG
GEDLHYARGA GISTFSMAGL RFGIAICYDL RFSDLFARYA EAGVDAMLVP AAWPCSRIEH
WERFLRMRAE EQGYYLIGIN TAAVTTPIDR YCGHSMIVDP SGTVLASADG TEQVLYATVN
PAMVCSAVQH DRPTTNGR