Gene Mpal_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1379 
Symbol 
ID7269984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1420641 
End bp1421210 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content40% 
IMG OID643570010 
Producthypothetical protein 
Protein accessionYP_002466432 
Protein GI219852000 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.203696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAA CAACAGATCA TGTAACGGTC AAAGCGATGA AGTTCGATCA ATTATTCAAA 
CAAATTACTC CAGAAGAGAT ATGCGACGAT GTATTTACGC TGGTTGGAAA AGTTTTTCCG
GTCATTACTG CGGGCAAGGA AGATCATTAT AATTCCATGA CAGCCAGCGG GGGTGGCCTG
GGGATGCTTT TCATGAAACC CACCACCTGG TGTATTCTTC GAGCAGACCG ATATACGCTT
GAAATGATTC TAAAAGAGCA AACATATACG ATGTCGTACT TCCCGAATGA ATATAAAGAA
CAAATACTCT TTCTGGGAAG TAAATCCGGA AGAGATAGTG AGAAGATGAA AGAAGTTGAA
TTGACCGGTG TTCAAACTCC TTCCGGAGAT ATGTCTTTTA AAGAAGCCAG ACTGATTATT
GAATGTAAAT TAACGCAGGT TACGACCCCA AATCCCCGTG ATTTTTACTC ACAGGAAGCG
AGAGATTATA TAAACGAAGC CTACAAAGAA GCAAACGATC ATCGCAGATA TGTATTTGGA
GAGATCACCC ATGTTTGGGT AAAGAAATAA
 
Protein sequence
MNETTDHVTV KAMKFDQLFK QITPEEICDD VFTLVGKVFP VITAGKEDHY NSMTASGGGL 
GMLFMKPTTW CILRADRYTL EMILKEQTYT MSYFPNEYKE QILFLGSKSG RDSEKMKEVE
LTGVQTPSGD MSFKEARLII ECKLTQVTTP NPRDFYSQEA RDYINEAYKE ANDHRRYVFG
EITHVWVKK