| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1296 |
|---|
| Symbol | |
|---|
| ID | 7271156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 1327655 |
|---|
| End bp | 1327924 |
|---|
| Gene Length | 270 bp |
|---|
| Protein Length | 89 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643569930 |
|---|
| Product | glutamyl-tRNA(Gln) amidotransferase, C subunit |
|---|
| Protein accession | YP_002466353 |
|---|
| Protein GI | 219851921 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit |
|---|
| TIGRFAM ID | [TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.74286 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCTTG AAAGTGACGT AGAACAGATC GCTGCGCTGG CTGATCTGAG GATACCGGAG
GACCGAATGG GCACTTTTAC CACCCAGTTC AACAGGATCC TCGAATATTT CGATATACTG
GACCAGGTCG ACGGTGAGGG TGGATCGATG GACCGTGGGG TGAATGTGAT GCGTGAGGAT
CTGATCGTGC CGTCCCTGAC CTCAGAGGAG GTCCTCTCCA ATGCAGGTGG ACAGGAGGAT
GGATTCATCA GAGGACCGCG GGTGATGTGA
|
|---|
| Protein sequence | MVLESDVEQI AALADLRIPE DRMGTFTTQF NRILEYFDIL DQVDGEGGSM DRGVNVMRED
LIVPSLTSEE VLSNAGGQED GFIRGPRVM
|
|---|
| |