| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1254 |
|---|
| Symbol | |
|---|
| ID | 7271532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 1282049 |
|---|
| End bp | 1282678 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643569888 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002466312 |
|---|
| Protein GI | 219851880 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.267995 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAACA CGAACCCGAT CCTGGCGCTC CTCACACCAG GGGTTTTTTT TGCAGCAAAA
AAACAGGATC CCTTCGATCT GAGAATCCCT GCACTGCTGG TCCTGATATC TGGGTTTGGA
GGTGCAGGGA CTGGCTATCT GAACAGTCAG ATCCAGAATC AACTGATTGG CCACACCCCC
ACGAGTTTGG ATCCTCTCCT GACCCTGGCT TCTGCGATCC TCATGGCCTA CCTGGTCTGG
GTGATCGTGA CCGGGATCTT TACGATCATC TCAAGGATTC TGTTCGGTGG TGGAGAATTC
CTGCAGCTGC TCCAGTTCAC CAGTTATGGG TTCATTCCAG GGTTCATCGG TTCGCTCATC
ACGATTCCGG TGCTGGCGCC GTTCACCGGA TCGCTCAGAC TGCCAGCGCT CGGGGATCCA
CAGATGATCG GAGCGATGGT CGACCAGATC CAGCACACCC AAACGATGCA GATGGTGACC
CTGATTGGGA TCATCTGCCT GCTCTGGAGT GGATATATCT GGATCTTTGG AGTACGGGAG
GCTGAAGACC TCTCCACTCA CCATGCGGCG ATCATCGTCT GTATTCCGAT CATCATCGCC
GTCGCAGTAA AAATAATTGG AGTTTTATAA
|
|---|
| Protein sequence | MENTNPILAL LTPGVFFAAK KQDPFDLRIP ALLVLISGFG GAGTGYLNSQ IQNQLIGHTP
TSLDPLLTLA SAILMAYLVW VIVTGIFTII SRILFGGGEF LQLLQFTSYG FIPGFIGSLI
TIPVLAPFTG SLRLPALGDP QMIGAMVDQI QHTQTMQMVT LIGIICLLWS GYIWIFGVRE
AEDLSTHHAA IIVCIPIIIA VAVKIIGVL
|
|---|
| |