Gene Mpal_1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1203 
Symbol 
ID7271481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1236629 
End bp1237381 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content55% 
IMG OID643569840 
ProductProtein of unknown function DUF128 
Protein accessionYP_002466264 
Protein GI219851832 
COG category[S] Function unknown 
COG ID[COG1693] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.991646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGGC TCCTAAAGTT CATCAACCAC AGTATCGAGG ATTTTGCCAT ACAGGTCACC 
TACAATCCGA CAGAAGGAAC CGGGCAGGTT GTATACAACC TCTCCGTGTT CCGGACCTGC
GATGTTGCTC CTGCTGTTGA GATCATCAGA GGCGCCTGCA GGTCAGGAGT CTGTGTCAGC
GATCTGGTAA AGTTCATCCC CGAAGGAGAG AGCCTCGATG GATATAAGAT CCCACCCGGT
TCGACCGGGA TCTGCACAGT CTGCTCGATC ACACTCGACG GACTGCTGCT CAAGAGAGGG
GTGCCGCTGA ACCCTATCGG CGGTGGGGTT ATCGAGATCG TCGACAGGAT TCCACGGCGA
TTCACCCAGA TCATCAGGTA TGAGGACACC ACCATCGACC CACTCCAGGT GCTGGCCTCG
CAGGACATCA CCTCGATATC CAGAGTGATC AGCACAGGAA ACGGAACAAT CCTTGCAAAC
ATCAGGGAAT GTCATATGGA AGCTGAACCA CTGGTAGCCG AACTGCTCGA CGACCTCGCA
GATAGCAGAT TCACCGGGGT GCTTGAGGTG GGGATGCCCA ACTCTCCATT GCTCGGGGTA
CAGATCTCAC CGCAGTACAT CGGGATGGTC GCAGTCGGCG GCACGAATCC GATCGCTGCG
GTTAAAGAGG CCGGATACCC TGTGATCACC CGGGCTATGA AAGGGCTGCT TGATGTCAGC
GAAATGGAGG AGATTAGCAC CAGCAGTTAC TGA
 
Protein sequence
MPRLLKFINH SIEDFAIQVT YNPTEGTGQV VYNLSVFRTC DVAPAVEIIR GACRSGVCVS 
DLVKFIPEGE SLDGYKIPPG STGICTVCSI TLDGLLLKRG VPLNPIGGGV IEIVDRIPRR
FTQIIRYEDT TIDPLQVLAS QDITSISRVI STGNGTILAN IRECHMEAEP LVAELLDDLA
DSRFTGVLEV GMPNSPLLGV QISPQYIGMV AVGGTNPIAA VKEAGYPVIT RAMKGLLDVS
EMEEISTSSY