| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1199 |
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| Symbol | |
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| ID | 7271477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1232176 |
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| End bp | 1233732 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643569836 |
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| Product | ribonuclease II |
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| Protein accession | YP_002466260 |
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| Protein GI | 219851828 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.548982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACAG TCATCGTGTA CATGAACGAT CACCACGATG TCGACCTGAA GGGTATTGCA
TGGAATGCTA TGGGGAAGTA TGGTTTCTCC CCTGAGTTCC CTCATTCTGT CATCAGGGAG
GTCAACGCCA TGGATGCGAG GCTATCCCAG AAGAGTCTGA TGGATGTCAG GGATATGCGG
TCCCTCCTCT GGTCGTCCAT CGATAATAAC GACTCGCTGG ATCTCGATCA AATAGAGTAC
TGCGAACGCA GGCCGGATGA CGAGATCCTG GTCTGGATTG CGATAGCGGA TGTTGATCGG
TATGTCCGGA GACAGTTGCA GACCGATCTT CACGCCGCCC ATAATGGGAC CTCGGTCTAT
ACCGGGATAG AGACCTTTCC GATGCTCCCG GACCGGCTCT CAAAGGGGAT ATCATCCCTT
CTGCCCGGCC AGGACCGGAT GGCGATCGTG ATCGAATATA CGGTTCTCCC GGACGGAAGC
ACCCGTCATG GCGAACCGTA CCGGGCTCTG GTGACCAACA GGGCGAAACT CATCTACGAA
GAGGTCGGCG ACTGGCTGGA GGGGACTCGC GGTGTTCCCC AAACGGTCAG AGATATCCCC
GGTCTGGATG ATCAGATCCG CCTGCAGCAC GAGGTAACCG TGCGGCTGCA GGGATACCGG
AGAGAGCAGG GGGCACTGGT GCTGAACACC GTCGAGGCCC AGCCGGTTGT GAAGGGGGGC
GTGGTCAGGG ATCTGGTGAT ACAGAGACAG AACCAGGCGC GGTGCCTGAT CGAGGAGTTC
ATGGTCGCAG CCAACGGAAC CTTGGTGGAT TATCTGGGGA GAGCCGGCGT ACCCATGATC
CAGCGGGTCG TCCGGGTACC AAAAAACTGG GATGGGATTG TGGTGACGGC TGCGCGGTAC
CATCAGTCCC TGCCCCGAAA TCCGGATGCA AAGGCTCTCT CAAAGTTCCT GATCCGGCAG
AAAAAAGCAG ACCCTGAACG TTTCCCCGAC CTCTCGCTGA CAATCGTGAA ACTTCTCGGG
GCTGGAGAGT ACATGATGCT CGCACCGGGT AGTGAACCAT TTGGTCACTT CTCGCTGGCC
GTCACCGACT ATACCCATGC TACAGCCCCA AACCGGCGGT ATGTCGACAT CATCAATCAG
CGGCTCCTCA AGTCGGTCCT CGATAGAGAA CCATGCCCAT ACACGGTGGA CGAACTGGTC
TCCCTCTCCA CCTGGTTGAC CGGTCGCGAG AAGGCATCCA AGAAGGTCGA ACGGTTCATG
CGAAAGGCTG TGGCCGCTGT GCTCCTGCAT GACAGAATAG GTGAACACTT TGCGGCGCTG
GTCACCGGTG CCTCTGAGAA AGGTACCTAC GTCAGGCTCA TCTCACCTCC GGCCGAGGGG
AGGGTACTAT CCGGTGAAGG CAATCTCCTG GTCGGTCAGA AGATCACGGT CCGGCTGGTG
AGGGCCGATC CCTACAGCGG TTTCATCGAC TTTGCATGCA TCGGCAGAGA AGCGAGTCGA
ACTGGACCGC GGGCATTCTC CGGTCACACA GTTGTCCCGC GCCGGCACAC CCCCTGA
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| Protein sequence | MNTVIVYMND HHDVDLKGIA WNAMGKYGFS PEFPHSVIRE VNAMDARLSQ KSLMDVRDMR
SLLWSSIDNN DSLDLDQIEY CERRPDDEIL VWIAIADVDR YVRRQLQTDL HAAHNGTSVY
TGIETFPMLP DRLSKGISSL LPGQDRMAIV IEYTVLPDGS TRHGEPYRAL VTNRAKLIYE
EVGDWLEGTR GVPQTVRDIP GLDDQIRLQH EVTVRLQGYR REQGALVLNT VEAQPVVKGG
VVRDLVIQRQ NQARCLIEEF MVAANGTLVD YLGRAGVPMI QRVVRVPKNW DGIVVTAARY
HQSLPRNPDA KALSKFLIRQ KKADPERFPD LSLTIVKLLG AGEYMMLAPG SEPFGHFSLA
VTDYTHATAP NRRYVDIINQ RLLKSVLDRE PCPYTVDELV SLSTWLTGRE KASKKVERFM
RKAVAAVLLH DRIGEHFAAL VTGASEKGTY VRLISPPAEG RVLSGEGNLL VGQKITVRLV
RADPYSGFID FACIGREASR TGPRAFSGHT VVPRRHTP
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