| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1155 |
|---|
| Symbol | |
|---|
| ID | 7270419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 1184629 |
|---|
| End bp | 1185570 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643569788 |
|---|
| Product | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
|---|
| Protein accession | YP_002466221 |
|---|
| Protein GI | 219851789 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCTC AACAATCTCT CAGAATCGGC CATCTTTCAA CGATGTACCA TACTGCATTC
CTGCTGCGAG GCTCGCAGAT TCTCGAAGAT CGCGGCATTG AAGCGACCTG GAAACTATTT
CCATCTGGCC CTGACATCAT CAAGGCCATG CAGGCCGGGA CCCTTGATCT TGGATATATC
GGTCTCCCCC CAGTGATCAT CGGGATCGAT CACGGGCTGC CCCTTGCCTG CATCGCAGGC
GGACATATTG AGGGTACGAT CATCATCGCC GGTGAGGAGA TCCTTCCTCT TACTGCGTTT
TGCAGCATGT CCGAGTTTCT CGAACAGTTC TCCGGTAAAG CGATCGGCAC CCCTCCACAG
GGATCCATCC ACGATGTTAT TGTTCGCGAG TTACTGCGGG AACACAGTAT TGACGATGTT
GCAGTGAAGA ATTATCCCTG GGCAGACTTT CTTCCCGATG CTCTCGCTAA AGGGGAGATT
GCTGCCGCTG CCGGTACCCC TGCCCTTGCT GTAACCGCAC GGCGTTATGG GAGAGCGAAT
CTGATGGTTC CTCCGGATAA AATCTGGCCC TTCAATCCGA GCTATGGGAT CGTGGTCATG
CGGCGGATGC TTGAACAAAA GGATCTCCTC TTGCACTTCC TTTCTGCCCA TGAAGACGCA
TGCGAACTGA TCCGGCATGA CCCGCGATCT GCAGCCGGCA TTGTGGCGAG AACAACCGGC
ATGGTTGACT TGGAGTTTGT GATGGATACG TATGGCATAT CCCCCAAGTA CTGCGCCTCC
CTCCCTCCAG AATACATCTC CTCCACCCTG AAGTTCATGC GCACCCTGTA TGAACTGGGA
TATATCTCAC AGCATGTGGG GGAAGATGCG ATCTTTGAAC CATCCCTGAT CCGTTCAATC
CACCCCGGCC CCCATCACTA CAATGATGGG ATCCTTCACT GA
|
|---|
| Protein sequence | MSAQQSLRIG HLSTMYHTAF LLRGSQILED RGIEATWKLF PSGPDIIKAM QAGTLDLGYI
GLPPVIIGID HGLPLACIAG GHIEGTIIIA GEEILPLTAF CSMSEFLEQF SGKAIGTPPQ
GSIHDVIVRE LLREHSIDDV AVKNYPWADF LPDALAKGEI AAAAGTPALA VTARRYGRAN
LMVPPDKIWP FNPSYGIVVM RRMLEQKDLL LHFLSAHEDA CELIRHDPRS AAGIVARTTG
MVDLEFVMDT YGISPKYCAS LPPEYISSTL KFMRTLYELG YISQHVGEDA IFEPSLIRSI
HPGPHHYNDG ILH
|
|---|
| |