Gene Mpal_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1142 
Symbol 
ID7270406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1172010 
End bp1173245 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content50% 
IMG OID643569775 
ProductO-acetylhomoserine aminocarboxypropyltransferase 
Protein accessionYP_002466208 
Protein GI219851776 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2873] O-acetylhomoserine sulfhydrylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0774662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACC CCGGATTCAC AACTCGGGCA GTTCATGGAC CCCTTACAGG AAAAGATCCC 
AACCATGCCC TTCAGTTTCC GATCTATGCA GGGGTAGCCC ACGACTTCGA GACTGCTGAA
ACAATGGCAG ATACTTTTGC AGGTCGAAAA GCTGCATTTG CTTATTCGCG CATAGCGAAC
CCGACGGTTT CGGCATTCGA GCGAAAAATT ACCGCATTGG AGGATGGATT AGGAACCGTC
GCGGTGTCAT CAGGCATGGC AGCCATCTCA AACACGTTGC TCAACCTGCT TACCGAAGGG
GACACGCTCG TAGCCGCCTC ATCCCTCTTT GGAGGAACCT ATTCTCTCTT TATTAATGTG
TTCCAACCTC TCGGTATAAA TGTAAAATTC GTGTCAATAA CGGATCTCGA CGGCCTGGAT
GCAGCGATCG ATGAGAATAC CCGGGTTTTG TTTCTGGAGA CGATCTCCAA TCCCTGCACC
ACGATTCCCG ACTTTGAGAG GATCTCAGAG ATCGCCAGCC GGCATCATGT CGTGGTGGTT
GCCGATAGTA CAGCAACGAC CCCGTACCTC TTCCCGGCAC GGCGTTTCGG AGTAAATATC
GTCATTCATT CGACAACGAA GTACATCTCA GGCGGTGCTA CCAGTATGGG AGGAGCGATC
GTCGACCTGG GAAATTTTGA CTGGTCTTTT GTCCCTGCCC TGAAGAAATA TCATCGGTAT
AAAGAGATGG CCTTTCTGGC ACGGCTGAGA AAAGAGGTGT ACCAGGAGAC GGGAAGTTGC
CTCTCCCCCT ATGATGCATA CCTCCAGAGT CTGGGATTAG AAACGCTTGC CCTCCGTATG
GAACAGATAT GCAAGAATGC ACAGGCTGTA GCTGAATTTC TAGAGGCACA GAACGTTGTT
ACAACGGTAT TCTATCCAGG TCTCCCTTCA TCTCAATCTC AGGAACTGGC CAAGAAACAG
TTGAACGGAA AGTGCGGAGG AATTCTGGCA TTCGGACTCT CGGACAGAAC AGCCTGCTTC
CGGTTCCTCG ATAAACTCTC CCTCATCAAA CGGGCATCGA ATCTGGGGGA CAACAAGACC
CTTGCATTGC ATCCTGCGTC GACGATTTTT GCAGGATTAA ATACCGATGA ACAGAAGACG
CTTGGCATAG ATGATACGCT CATCAGACTC TCCATCGGGA TCGAAGATGC GGATGACATC
ATCGCCGATA TTCGGCAGGC ACTTGGTGAA TCATGA
 
Protein sequence
MKHPGFTTRA VHGPLTGKDP NHALQFPIYA GVAHDFETAE TMADTFAGRK AAFAYSRIAN 
PTVSAFERKI TALEDGLGTV AVSSGMAAIS NTLLNLLTEG DTLVAASSLF GGTYSLFINV
FQPLGINVKF VSITDLDGLD AAIDENTRVL FLETISNPCT TIPDFERISE IASRHHVVVV
ADSTATTPYL FPARRFGVNI VIHSTTKYIS GGATSMGGAI VDLGNFDWSF VPALKKYHRY
KEMAFLARLR KEVYQETGSC LSPYDAYLQS LGLETLALRM EQICKNAQAV AEFLEAQNVV
TTVFYPGLPS SQSQELAKKQ LNGKCGGILA FGLSDRTACF RFLDKLSLIK RASNLGDNKT
LALHPASTIF AGLNTDEQKT LGIDDTLIRL SIGIEDADDI IADIRQALGE S