| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1068 |
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| Symbol | |
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| ID | 7270984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1102091 |
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| End bp | 1104748 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643569703 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_002466137 |
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| Protein GI | 219851705 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.122951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTC AACAGTGTAC TAATGAACTT GATACAACAA AAGAAAAGGC ACAACAGTTT
GAGTTCCTCT CAGCCGGGGT CAATCAACTG CCGATCCCAC TTCATATCAT CGATACCACG
TATACGATCA CCTCTATTAA TGAGGCTGCA GCAACGCTGA TTGGAAAGAA ACGGGAAGAT
GTCATCGGTA AACGATGTTC CGATATTTAT CGGTCAGGGG CCTGCAACAC CCCGGAGTGC
CCATGCAGAA TTGCGATGGA GAAAGGGATC CCCCATCACT GCGAAATCAC CCTCGGTGAG
AGGATCATCG ACGGGACCGG AGTACCGATG ACCGATAGCA CTGGGAGAGT GATCGGTGCG
ATCGAATACT TCTCTGACGT GACCGGACAG AAAAAAGCAG TCACCGATAT TGTCCAGGTC
ACTGAAAAGG TGAAGAGCGG GGACCTCCTG GCACGGACGG ATCTCACCAT CCACACCGGC
GACTTCAAGA AGATGGCCGA AGAGATCAAC AGCCTTCTTG ACATCTTCGT CGAGAAGAAC
ACCTGGTACA AAGCGATCAT CGACGCGGTG CCGTTCCCGA TTCACGTCAC CGATATGGAG
ATGAAGTGGA CACTGATGAA TTCAGCCTTT GAGAAGGTGC TGATAGACCA GGGAGCAATT
AAGGACCGTG ATTCGAGCAT GGGGATGCCC TGTTTCACGG CCAACGCGAC GATCTGTAAC
ACGGATAATT GTGGGATCCG GCAGCTGCAG AAGGGGGTTC CTGAGAGTTA CTTCGACTGG
GGCGGGAGGA GTTTCAAGCA GGCCACTTCA TTCCTCAATG ACAAAAAAGG CGTTCATATC
GGGTATGTTG AAGTCGTGCA GGATCTCACC TCGATCCTTG CGGTCAGAGA CTTCACCAGG
GCCGAAGTGG ACCGGATGGC CGCGAACCTC TCCCTGCTCG CAGAGGGGAA CCTCAATTTT
AACCTCGACG TCAGGCAGGT CGACGAGTTC ACCCTGGCAG AGCATGCCGA CTTTTTGAAG
ATGAACGAGA GTCTGCAACA GGTGCAGCAG GCTGTCAGCA CACTTATCAA CGACGGGATC
CAGCTCACCG AATCAACGGT AAAAGGAAAC CTTTCGGTTC GTGCAGATGC ATCCAGACAC
AAGGGAGACT TCAAACGGAT CATCGAAGGA TTCAATGATA CACTTGATGC GATCATTCTC
CCAATCGAGG CGGGTAACAA AGTCCTGTGC CAGATCCGGG GCGGTGACCT GAGCGAACGT
ATGGAGATCG AGTGCTCTGG CGATCATCAG AAGATGAAGG ACGCGATCAA TGGCGTCCAT
GCATGGTTGA ATGACCTGAT CGCATTTATC ACAAAAATTG CCAATGGTGA TCTCACCGCG
AATATAAATA AGTCGTCTGA ACATGACCAG GTCCATGAGT GGCTGATGCT CCTTAAGGAT
AACATCAATG CGCTCGTCGC CGATACAGAG ATGCTCTCAG GTGCGGCAGT CGAAGGAAAA
CTCGCGATCA GGGCCGATGC AACAAAACAT CAGGGTGACT TCCGGAAGAT CATCGAGGGA
TTCAATAAGA CGCTCGATGC CGTGATCGAG CCGGTCAACG AGGCGATGCG GGTCGCGAAC
GAGTTCTCCC AGTACAACTA CAAGGCTAGG ACCGACAAGA ATCTCAAAGT AGCCGGAGAC
TTTATCAAAT TCAGGGATGC CCTGGACAAT ATTGGGATCT CGATCTCGGC TGCAATCGGA
GAGATCAGCG TCCAGGTGAC CGATCTTGCA GCCTCGGCAG AGGAGGCGAA CGCCAGCATT
GAGGAAGTGA TCTCAGGTGC ACAGCAGGTC GCTGAAAGTG CCGGCAAGGT CAGTTCCAAC
GCCGAGAAAG GGAATCAGGG TCTCGAACAG GTGCTCAAGG CGATGGAGGA CCTCTCTGCC
GCCGTCGAGG AAGTGACCGC CAGCAGCGAG TCTGTAGCCA CCCTTGCAAA CGGTGCGAAC
ACCCTCTCCA AGGACGGGGC CGAGCTCGCA CGGAAGGCCG AACAGGGGAT GGTCGGGATC
ACCCGATCCA CCACGGAGGT TGACCAGATC ATCGGCGAGA TCAAGGTCGA GATGCAGAAG
ATCGGAAAGA TCGTCGGCCT GATCTCGGAC CTGGCCAACC AGACCAACCT GCTCGCCCTG
AACGCAGCCA TCGAGGCCGC CCGGGCCGGC GATGCCGGCC GTGGGTTCGC CGTGGTCGCC
GCGGAGGTGA AGTCCCTCGC CCAGGAGTCG AGGACCTCAG CAGAATCAAT CGCCGAGATG
ATCGGCGGTC TCCAGCACAA GTCAGAACTG GCCGCACAGG CGACCGCATC CGCCTCAAAA
GAGGTCGGTG AGGGGTCAGC GGTCCTCTCT GAGACTTTGA ACATCTTCAA CAGAATTGTC
GGTGATATTG AGAAGATCAC CCGCTCGGTC GAAGAGGTTG CAAGCGCCTC CGAAGAGCAG
GCAGCCACCG TCGAGGAGAT CACGGCCAGT GTTCATGAGG TGAGTTCCCT GGTGGACGGA
ACGGCCAGCG ATGCAGGGGA TGCAGCAGCA GCCAGCGAGG AGTCCTCGGC GGCGATCGAC
GAAGTCGGAA AGATCATTGA AAACGTGAAT ATAGTCGTCG ATAAAGTCTC CATGGGGATA
GGCAGGTTCA GAGTCTAG
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| Protein sequence | MDFQQCTNEL DTTKEKAQQF EFLSAGVNQL PIPLHIIDTT YTITSINEAA ATLIGKKRED
VIGKRCSDIY RSGACNTPEC PCRIAMEKGI PHHCEITLGE RIIDGTGVPM TDSTGRVIGA
IEYFSDVTGQ KKAVTDIVQV TEKVKSGDLL ARTDLTIHTG DFKKMAEEIN SLLDIFVEKN
TWYKAIIDAV PFPIHVTDME MKWTLMNSAF EKVLIDQGAI KDRDSSMGMP CFTANATICN
TDNCGIRQLQ KGVPESYFDW GGRSFKQATS FLNDKKGVHI GYVEVVQDLT SILAVRDFTR
AEVDRMAANL SLLAEGNLNF NLDVRQVDEF TLAEHADFLK MNESLQQVQQ AVSTLINDGI
QLTESTVKGN LSVRADASRH KGDFKRIIEG FNDTLDAIIL PIEAGNKVLC QIRGGDLSER
MEIECSGDHQ KMKDAINGVH AWLNDLIAFI TKIANGDLTA NINKSSEHDQ VHEWLMLLKD
NINALVADTE MLSGAAVEGK LAIRADATKH QGDFRKIIEG FNKTLDAVIE PVNEAMRVAN
EFSQYNYKAR TDKNLKVAGD FIKFRDALDN IGISISAAIG EISVQVTDLA ASAEEANASI
EEVISGAQQV AESAGKVSSN AEKGNQGLEQ VLKAMEDLSA AVEEVTASSE SVATLANGAN
TLSKDGAELA RKAEQGMVGI TRSTTEVDQI IGEIKVEMQK IGKIVGLISD LANQTNLLAL
NAAIEAARAG DAGRGFAVVA AEVKSLAQES RTSAESIAEM IGGLQHKSEL AAQATASASK
EVGEGSAVLS ETLNIFNRIV GDIEKITRSV EEVASASEEQ AATVEEITAS VHEVSSLVDG
TASDAGDAAA ASEESSAAID EVGKIIENVN IVVDKVSMGI GRFRV
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