Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1016 |
Symbol | |
ID | 7271750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 1045816 |
End bp | 1046238 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643569653 |
Product | hypothetical protein |
Protein accession | YP_002466087 |
Protein GI | 219851655 |
COG category | [S] Function unknown |
COG ID | [COG4048] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.166625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCAGT ACACGATCTC TGCCAGTGCA GGGCCCGATG ATCTGATCCC GATCATGATG GCGATGCATG AACTGCTGAA CCGGCTCCCG GTTACGGCAC GTTCTCGTGA ACACCACGGG ATCAGGATCG AAGATGGCAG GGTCGTGGAC GCTGCTTACA CAGGCCCGGT TCTTGAAGAA GTGTTGGAGA AGAACCAGAT CGTGAAGAGA ACGCCTGCAT CAGGAATTTA TGTTCGGGTG CCGGTGGTGG TCACGCCAGT GCGGGACCAG GATGGCGAGG CGATCGCAGC CATCGGTGTC GTGGATATCA CCGGCATCTT TGACCTTGCA AATCTGATGG AGCATCAGTC CGAAATATTA AAACAAGTCT GCGGGAAAGA TCCGTGTCCG CTCCCAGGCG AGCAGATCGG CGCAAAAAGG TAA
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Protein sequence | MHQYTISASA GPDDLIPIMM AMHELLNRLP VTARSREHHG IRIEDGRVVD AAYTGPVLEE VLEKNQIVKR TPASGIYVRV PVVVTPVRDQ DGEAIAAIGV VDITGIFDLA NLMEHQSEIL KQVCGKDPCP LPGEQIGAKR
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