Gene Mpal_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1016 
Symbol 
ID7271750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1045816 
End bp1046238 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content56% 
IMG OID643569653 
Producthypothetical protein 
Protein accessionYP_002466087 
Protein GI219851655 
COG category[S] Function unknown 
COG ID[COG4048] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.166625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCAGT ACACGATCTC TGCCAGTGCA GGGCCCGATG ATCTGATCCC GATCATGATG 
GCGATGCATG AACTGCTGAA CCGGCTCCCG GTTACGGCAC GTTCTCGTGA ACACCACGGG
ATCAGGATCG AAGATGGCAG GGTCGTGGAC GCTGCTTACA CAGGCCCGGT TCTTGAAGAA
GTGTTGGAGA AGAACCAGAT CGTGAAGAGA ACGCCTGCAT CAGGAATTTA TGTTCGGGTG
CCGGTGGTGG TCACGCCAGT GCGGGACCAG GATGGCGAGG CGATCGCAGC CATCGGTGTC
GTGGATATCA CCGGCATCTT TGACCTTGCA AATCTGATGG AGCATCAGTC CGAAATATTA
AAACAAGTCT GCGGGAAAGA TCCGTGTCCG CTCCCAGGCG AGCAGATCGG CGCAAAAAGG
TAA
 
Protein sequence
MHQYTISASA GPDDLIPIMM AMHELLNRLP VTARSREHHG IRIEDGRVVD AAYTGPVLEE 
VLEKNQIVKR TPASGIYVRV PVVVTPVRDQ DGEAIAAIGV VDITGIFDLA NLMEHQSEIL
KQVCGKDPCP LPGEQIGAKR