| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0984 |
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| Symbol | |
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| ID | 7271716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1012699 |
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| End bp | 1014036 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643569622 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002466058 |
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| Protein GI | 219851626 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0111157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.198492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCCG ACGAGGGGAC GATTGTCTCG TTTGATCTCC TTTCCCAGAT CAAGAGCATC
CTCAAAAACA ACCCAAAAGG GATGTCCGTC ACCGACATCT CACACAAGTT GAAGATGAAC
AGGAACTCTG TCGCCAAGTA CCTGGACATC CTCTCAATAT CCGGACAGGT TGAGATGCGG
ACCTTCGGCC CTGCCAAGGT CTATTTTCTC TCTCAAAGAG TCCCGCTCGG AGCCATGCTG
AACCATACAT CTGAATTTAT TCTGGTGCTG GACAGCGGAC TCCGGGTGAT CCAGATCAAC
GACCGGTTCC TCGTATTTCT CAAGGAGGAC CGGGACTATT ACCTGGGAAA GACGCTCGAA
GAGACGGTGA TACCGATCGT CTCCGAACAG ATTATCATGG ATAAGATCCA GGAGACCTTC
ACGAAGAAGG AGGTGATGCT GGAGGTCCAG TACACACAGG AGGATGGAGA TCTCTTCTTC
CGGGTGAAAC TGATATCGAC GGTCTTCGAT GATGGTACTC CGGGGGTCAC CATCATCCTC
GAAGAGATCA CCAGCCAGAA ACGAGCAGAG ATTGCTCTGA AGGAGAGTGA ACAGCGGTTT
CGGGAGATGG TCGAGGTCTC ACCATACCCG ATCTCGATCA TCGATCCGCA CGGTACGTAT
CTGTTCATCA ACAGCAAGTT CACCGAAGTC TTCGGGTATA CCAGGGATGA GATCACCAGT
GGGAGGGACT GGTTCAGTGC TGCGTACCCC GACGAGACCT ATCGGAAGCA GGTGATCCAT
GCCTGGATCA CCGATATCGA ACAGGCAGGG GAGAGGCCGA TCAGTCCGCG GCTCTTCCAG
GTCACCACCA GATCCGGCGA GGTGAAGGAG GTGATCTTCC GGACGGTCAG ACTCTCGGAC
CAGAATCATT ACATCACCTA CGAAGACATC TCTGAACGGA GGAGAGTCGA GGAGGCACTC
GCCGAACAGA AAAGGGTCGA TGAGGTGGTC TTTACCAGTG TACAGCGGAC CAGAGAGATC
GCAGAGCGGT CACTGGACCT GCTCTTCGGG CTCGACCCTG AGGGAAAGAT CACGCAGGTA
TCCCCCTCTT TCGAAAGAAT CACATCGTAT TCGTTGGAAG AGGTCAGGGG ACGAATGATC
AGCGATCTCA TCCAGGAAGC TGAGATCCCG CTCTCGAACG AATTCTTCAG GCTGATGCAT
GCCGGCGAGG AGATCGAAGG GATCGAACTT CATCTGATCA AAAAGGACGG TTCTGTGATT
CCCATGATGA TCAACCTGGT ACCGAAGATG TCAGGAACTA CGATCGTTGG AATCCAGGGT
AAACTTCTCT GGGTTTAG
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| Protein sequence | MPSDEGTIVS FDLLSQIKSI LKNNPKGMSV TDISHKLKMN RNSVAKYLDI LSISGQVEMR
TFGPAKVYFL SQRVPLGAML NHTSEFILVL DSGLRVIQIN DRFLVFLKED RDYYLGKTLE
ETVIPIVSEQ IIMDKIQETF TKKEVMLEVQ YTQEDGDLFF RVKLISTVFD DGTPGVTIIL
EEITSQKRAE IALKESEQRF REMVEVSPYP ISIIDPHGTY LFINSKFTEV FGYTRDEITS
GRDWFSAAYP DETYRKQVIH AWITDIEQAG ERPISPRLFQ VTTRSGEVKE VIFRTVRLSD
QNHYITYEDI SERRRVEEAL AEQKRVDEVV FTSVQRTREI AERSLDLLFG LDPEGKITQV
SPSFERITSY SLEEVRGRMI SDLIQEAEIP LSNEFFRLMH AGEEIEGIEL HLIKKDGSVI
PMMINLVPKM SGTTIVGIQG KLLWV
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