| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0842 |
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| Symbol | |
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| ID | 7272332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 868560 |
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| End bp | 870449 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643569491 |
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| Product | carbon-monoxide dehydrogenase, catalytic subunit |
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| Protein accession | YP_002465927 |
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| Protein GI | 219851495 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1151] 6Fe-6S prismane cluster-containing protein |
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| TIGRFAM ID | [TIGR01702] carbon-monoxide dehydrogenase, catalytic subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.183197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.106762 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGATC CAATTGCGAT AAAGAAGGTG GCAGAGAAGC GGGCGCTGGA CAGGACCAGC
CAGATGATGA TCGAGAAGAC GATCGAAGAC GGTGTCGAGA CCGCCTGGGA CCGGCTGCAG
GCGCAGCAGC CGCAGTGCGG GTTCGGGCAG CTCGGGCTCT GCTGCAACAA CTGCTCGATG
GGACCCTGTC GGATCGATCC CTTCGGCGGA ACGCCGACGC GGGGTGTCTG CGGGGCGACG
GCGGACACGA TCGTGGCGAG GAACCTGCTC GACGACCTCG CCGTCGGTGC GGCCTCCCAC
TCGGATCACG GCCGGGAGGT CGTCGAGACG CTCCTCCATA CCGCAGAGGG GAAGGCCCAG
GGTTACCAGA TCACGGATGC GGTGAAGTTG CACCTGATCG CCGAGGAGTA CGGGATTCCG
ACCGAGGGCC GGGATGACGC AGCGATCGCC GGCGACCTCG CCCGGGGGAT GCTCGAGGAG
TTCGGATCGA TCAAGAACCG GATCCAGCTG GTTGACCGGG CCCCGGAGAA GACCCGGAAG
GTCTGGCAGG ATCTGAACAT CACTCCCCGG GGCGTGGACC GGGAGGTCGT GGAGGCGATG
CACCGGGTGC ATATGGGGGT CGACGCCGAT TATCTGAACA TCCTGCTGCA TGCGATGCGG
ACCTCGCTCT CTGACGGCTG GGGCGGGTCG ATGATGGCGA CCGACTGCTC CGATATCCTC
TTCGGGACCC CGACGCCGGT CACTTCCTTG GCGAACCTGG GCACGCTCAG CAGGGATAAA
GTCAATATCG TCCTCCACGG ACACAACCCG GTCCTCTCCG AGATGATCCT CAAGGCGGTG
GAGGAGCCGG CGGCCAAGGA GGCGGCCCGG GCGAAGGGTG CGGCCGGCAT CAACCTGGTG
GGGATGTGCT GCACCGGGAA CGAGGTGCTG ATGAGGCACG GGATCCCGAT CGCCGGCACG
ATCCTGGACC AGGAACTGGC CATCGCCACC GGAGCCGTGG AGGTGATGGT GATCGATTAC
CAGTGCATCT TCCCGTCCAT CACGGCGACG GCCAGCTGTT ATCACACGAA GGTCGTGGCG
ACCAGTGAGA AATCCAAGGT GCCGGGTTCG ATCTACAAGG AGTTCAGGCC CGAGACGGCG
CTGGACACGG CCAGGGAGAT CGTGGGGATG GCGATCGAGA ACTTCGCCGC CAGGGACCCG
AACCGGGTCA GGATCCCGGA CCGGCCGGTC CAGATGATGG CCGGGTTCTC TGAGGAGGCG
ATCAGAAAGG CCCTCGGAGG TACCTATAAA CCTTTGATCG ATGCGATCGT CGCCGGCACG
ATCAAGGGGG TTGTCGGGGT TGTCGGCTGC AACAACCCGA AGATCAAACA GGACTCAGGA
CATATCGCCC TCGGCAGGGA ACTGATCAGG CGGAACATTC TCGTCGTCGA GACCGGGTGT
GCGGCCATCG CGAGCGGAAA GGCCGGCCTG CTCGTCCCCG AAGCGGCGGA CCTGGCCGGG
GACGGGCTCA AGGCGGTCTG CAAGGCCCTG GGGATCCCGC CGGTGCTGCA CATGGGCTCA
TGTGTCGACT GCTCCCGGAT CCTGGTGATG GCCTCGCATG TGGCGGACGA ACTGGGCGTT
GGGATCGGCG ATCTGCCGCT CGGGGGGGCC GCCCCCGAAT GGTACTCGCA GAAGGCGATC
GCGATCGGGA CGTACTTCGT CTCGTCGGGT GTCTACACGG TGCTCGGGAT CCCCCCGAAG
ATCTTCGGCA GCCAGAACGT CCTCTCCCTC CTCGCGAGTC AACTCACAGG CGTGGTGAAC
GCCTCCTTCG CAGTCGAACC GGACCCCGTC AAGGCGGCCG ACCTGCTCGA GGCGGAGATC
GATCGGAAGC GACAGGCGCT CGGGATCTGA
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| Protein sequence | MYDPIAIKKV AEKRALDRTS QMMIEKTIED GVETAWDRLQ AQQPQCGFGQ LGLCCNNCSM
GPCRIDPFGG TPTRGVCGAT ADTIVARNLL DDLAVGAASH SDHGREVVET LLHTAEGKAQ
GYQITDAVKL HLIAEEYGIP TEGRDDAAIA GDLARGMLEE FGSIKNRIQL VDRAPEKTRK
VWQDLNITPR GVDREVVEAM HRVHMGVDAD YLNILLHAMR TSLSDGWGGS MMATDCSDIL
FGTPTPVTSL ANLGTLSRDK VNIVLHGHNP VLSEMILKAV EEPAAKEAAR AKGAAGINLV
GMCCTGNEVL MRHGIPIAGT ILDQELAIAT GAVEVMVIDY QCIFPSITAT ASCYHTKVVA
TSEKSKVPGS IYKEFRPETA LDTAREIVGM AIENFAARDP NRVRIPDRPV QMMAGFSEEA
IRKALGGTYK PLIDAIVAGT IKGVVGVVGC NNPKIKQDSG HIALGRELIR RNILVVETGC
AAIASGKAGL LVPEAADLAG DGLKAVCKAL GIPPVLHMGS CVDCSRILVM ASHVADELGV
GIGDLPLGGA APEWYSQKAI AIGTYFVSSG VYTVLGIPPK IFGSQNVLSL LASQLTGVVN
ASFAVEPDPV KAADLLEAEI DRKRQALGI
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