Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0604 |
Symbol | |
ID | 7270191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 593462 |
End bp | 593842 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643569252 |
Product | nucleotide binding protein, PINc |
Protein accession | YP_002465698 |
Protein GI | 219851266 |
COG category | [R] General function prediction only |
COG ID | [COG1412] Uncharacterized proteins of PilT N-term./Vapc superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGGTTC TGATCGATGC CAATGCACTG ATGATGCCGG CCCAGTTCCG GGTCGATCTC TTCGGTGAGT TGACACGGCT GATCGGGGCG CACGAGCCGC TGGTGCTGGA GGATGTCGTC ACTGAACTGC GCGGACTCTC CCTCTGCAGG GGAAAGAACG GGGCTGCTGC TCGATACGGG CTGGCGATGG CAGAACAGTG TACAATCGTC ACCAGCACCT GCACAGCCCC TCAGGTGGAT GATCGGATCA TTGCGTATGC GTACGAACAC CAGTGCCCTG TAGTCACCAA CGACCGACGG ATGCGCAGGT TGCTCTTGAT CGAGGGCATC CCTGTTATTG GGATGAGAAA ACAGAGAACT ATGGAATTTA TCAGGGGATA G
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Protein sequence | MKVLIDANAL MMPAQFRVDL FGELTRLIGA HEPLVLEDVV TELRGLSLCR GKNGAAARYG LAMAEQCTIV TSTCTAPQVD DRIIAYAYEH QCPVVTNDRR MRRLLLIEGI PVIGMRKQRT MEFIRG
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