Gene Mpal_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0604 
Symbol 
ID7270191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp593462 
End bp593842 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content57% 
IMG OID643569252 
Productnucleotide binding protein, PINc 
Protein accessionYP_002465698 
Protein GI219851266 
COG category[R] General function prediction only 
COG ID[COG1412] Uncharacterized proteins of PilT N-term./Vapc superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGTTC TGATCGATGC CAATGCACTG ATGATGCCGG CCCAGTTCCG GGTCGATCTC 
TTCGGTGAGT TGACACGGCT GATCGGGGCG CACGAGCCGC TGGTGCTGGA GGATGTCGTC
ACTGAACTGC GCGGACTCTC CCTCTGCAGG GGAAAGAACG GGGCTGCTGC TCGATACGGG
CTGGCGATGG CAGAACAGTG TACAATCGTC ACCAGCACCT GCACAGCCCC TCAGGTGGAT
GATCGGATCA TTGCGTATGC GTACGAACAC CAGTGCCCTG TAGTCACCAA CGACCGACGG
ATGCGCAGGT TGCTCTTGAT CGAGGGCATC CCTGTTATTG GGATGAGAAA ACAGAGAACT
ATGGAATTTA TCAGGGGATA G
 
Protein sequence
MKVLIDANAL MMPAQFRVDL FGELTRLIGA HEPLVLEDVV TELRGLSLCR GKNGAAARYG 
LAMAEQCTIV TSTCTAPQVD DRIIAYAYEH QCPVVTNDRR MRRLLLIEGI PVIGMRKQRT
MEFIRG