| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0574 |
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| Symbol | |
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| ID | 7270158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 567680 |
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| End bp | 568807 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643569220 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002465669 |
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| Protein GI | 219851237 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.194056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCCC TTCTCCCCTC GTCTGAAGAT ATTCTGTCTC TCCTCTGCAG CATGATAGAT
CAGTTACCAG ACCCCGGGTT TGTGGTGGAG CGTTCTGGTC GTATCATCGG TTGGAATCGA
CGGCTCGAAA CGCTCTCGGG TGTTTCCCGT GATGATATGG TGGGGATGGA TGGGACGGCG
TGCGGAATCC TCTTCTATGG GGACGAACGT CCCCCTCTTG TCGACCTGAT ACTTCCATCC
CGGACCCCTC CTGATCTGAT CCCGTATGCC ATCCTGGAAC TGGATCCGGG GGCTGTATCA
GCAGAAGTTC ATCTGCCCTG TCTCAGGGGG GGGGCCGGTG GCCTGGTGCT CGCGAAGACT
GCTGTGGTGA CGGATCGTTC GGGGGCGGTG ATAGGGGGGA TCGAGACTTT GACCGATATC
AGCGCTCAAC GATCTGCTAT TGAGCGTTTG CTCTCTGCCA ATGCCAATCT CCAACAGGCC
AACCGGGTGG TCAGGCATGA CATTATGAAC GAACTGACGA TTGTGCTCGG GTATCTCAAT
CTTGCAGGCG AATCGGTCAC CGACCCCGAA GTGCAGGGGG ATCTGGCCCG GGCAAGCCTT
GGGGCGCGGC AGATTCAGCA ACTGATCGAG TTCACGCGTG AGATTCGGTC CCATGGCACA
GTCCTCCCAT CCTGGCAGCA ACTCGACAAG GTGGTCGCTG CTGCGCTCAA GAACTCCACC
TCCTGTGTCC CCACTGTTAC GGTAAGGGGG GACGCGGTTC GTCTCCTTGC AGACTCACTC
TTGGTAAGGG TGATCTCTAC GCTCCTCACC GATACCTACC AGCGGGGAGG GAATCTGGTT
GAACTCTGGA CAGAAGAGCA CGGGGATCAT CTCTGTATCA TCTATACTGA TGATGGAGAT
GGGATCCCTG AATACGAAAA AGAGCGAATA TTTGGTGAAA ATTTTGATAA GGTGCGGGGA
TATGGCCTCT TCCTTGATCG TGAAATTCTG GCGGTGACCG GGATTACTCT ACGGGAGACC
GGGGATCCGG ACAGGGGGGC CCATTTTGAG ATAGTCGTGC CGGCCGGCGC ATATCGGATC
CTCACTGGCC AGGAAGTATC TGGTTCAGAT TGGGTCGTTG ATCTTTAG
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| Protein sequence | MSSLLPSSED ILSLLCSMID QLPDPGFVVE RSGRIIGWNR RLETLSGVSR DDMVGMDGTA
CGILFYGDER PPLVDLILPS RTPPDLIPYA ILELDPGAVS AEVHLPCLRG GAGGLVLAKT
AVVTDRSGAV IGGIETLTDI SAQRSAIERL LSANANLQQA NRVVRHDIMN ELTIVLGYLN
LAGESVTDPE VQGDLARASL GARQIQQLIE FTREIRSHGT VLPSWQQLDK VVAAALKNST
SCVPTVTVRG DAVRLLADSL LVRVISTLLT DTYQRGGNLV ELWTEEHGDH LCIIYTDDGD
GIPEYEKERI FGENFDKVRG YGLFLDREIL AVTGITLRET GDPDRGAHFE IVVPAGAYRI
LTGQEVSGSD WVVDL
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