Gene Mpal_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0533 
Symbol 
ID7271949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp534513 
End bp534833 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content55% 
IMG OID643569180 
ProductRNAse P, Rpr2/Rpp21 subunit 
Protein accessionYP_002465629 
Protein GI219851197 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2023] RNase P subunit RPR2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000671955 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.92433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTA AGTCACAGAA CAGACAGACC AAGAAACTTG CCGGGGAACG TATCGCGATC 
CTCTTTACGC AGGCGAAGGT CTTCGCCGGG ATCAACCCGG CCTGGAGTGA CCGGTGCGTG
GAACGGGCCA GGGCCATTGC AATGCGGCAG CGGATGCGGA TGGAACGGGA ACAGAGAAGA
CAGTATTGTC ACCACTGTTA TGCGTACTTT CTGCATGGTG TGAATGTTCG GGTCCGTGTC
CACCGTGGAC ATGTGATCGT GACCTGCCTT AACTGCGGGC GCCAGACACG GTATCAGGTG
GTGAGGACAG ATAATAGATA A
 
Protein sequence
MTVKSQNRQT KKLAGERIAI LFTQAKVFAG INPAWSDRCV ERARAIAMRQ RMRMEREQRR 
QYCHHCYAYF LHGVNVRVRV HRGHVIVTCL NCGRQTRYQV VRTDNR