| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0432 |
|---|
| Symbol | |
|---|
| ID | 7271458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 450164 |
|---|
| End bp | 450655 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643569077 |
|---|
| Product | CBS domain containing protein |
|---|
| Protein accession | YP_002465529 |
|---|
| Protein GI | 219851097 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0517] FOG: CBS domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.05465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAG CTGAAGCAGT GCAGTCGGAT CTGGCACTGA CCCCGGTCAG CGAGATCATG
CGTGAGACCG TGTTGAAGGT CATCCCTGAA ACACCGGTGA TCGAGATCTT CTCGTGGTTT
CGCAAGCGGG GACACACCCA TCTAATCATC ACCGACGCCG AAGGGAGCGT GCTCGGGGTG
ATCACATCGT TTGACCTGCT CTCTGCGATC AGCCCGACGA TCGGAATCCA GAGTGGAAGA
AAATACTTGA GCCTCGACCG GCTGATCAAG TCCAACGCGC GGGTGGCAGG GGATCTGATG
GCCCCGATAC CGGTGATCAT GAACGGAACA GAACCACTGG TCAGGGCACT CGAGATGATG
GAGCATTACC GATACCCTTA CACGGTCGTC ACCGATAAAA AAGGACACCT GACTGGGATC
GTTGAGTTCG CCGATATTGT GAAATTTCTC ATTAATAAAG GGCATATCCT GGGCGAGAAG
AGTTCTCCGT GA
|
|---|
| Protein sequence | MNEAEAVQSD LALTPVSEIM RETVLKVIPE TPVIEIFSWF RKRGHTHLII TDAEGSVLGV
ITSFDLLSAI SPTIGIQSGR KYLSLDRLIK SNARVAGDLM APIPVIMNGT EPLVRALEMM
EHYRYPYTVV TDKKGHLTGI VEFADIVKFL INKGHILGEK SSP
|
|---|
| |