Gene Mpal_0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0418 
Symbol 
ID7271444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp434407 
End bp435534 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content63% 
IMG OID643569063 
ProductAlanine--glyoxylate transaminase 
Protein accessionYP_002465515 
Protein GI219851083 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAACG AACCGTTACT GATGCTGCCA GGGCCGGTAC CGATGCCTGA ACGGGTCCGG 
TACGCCATGA TGCAGCAGGC GATGAACCAT CGCAGCGCAG CGTTTGGCGC TGTCTATGCA
GACTGTGTAA AGACGCTGAA GACCACCTTT GGGACCACCA ATGACCTCTC AATCCTCTCG
GGATCCGGGA CCGCTGCGAT GGAGGCTGCG GTCGCCAACT TCGGAAAGGG TAAACAGATT
GCTTCGCTGG TCAACGGCAA GTTCGGCGAT CGACTCTGTA AGATCGGGGC CCTGTACGGG
ACCTCGCACG AAATAGCCTC TGAATGGGGA ACCCCGCTGA ACCTCGACCT CCTCGCTGAA
AACCTGGAGA ACGGCGCTGA AGTGGTGACC CTGGTGCACA ACGAGACCTC CGCAGGGATC
AAGAACCCGG CGGCTGAGGT AGGGAAACTG ACACGTAAGC ATGACGCCCT CTTCATCATG
GACGGGATCA CCTCGATCGG CGGCGATCTG GTCGAGGCTG ACCGGTGGGG CGTCGATGTC
GCAATGGTCG GCTCGCAGAA GTGCCTGGCC GCGCCGGCCG GGCTGGCCGC CATATCGGTA
TCAGAACGGG CCTGGGAACG GATCGCCGAC CAGCGACCGT TCTACCTGGA CCTCGCCGCC
TACCGGAAGA ATGCTGCCAA GACCCCGATG GAGACCCCGT ACACGCCGGC GGTTCCACTC
TTCCTGGCGC TCAGGGAGGC ATGTGCCATC GTCGAGGAGG AGGGGCTTAC TCACCGGATC
GCCCGACATA CCCGGATGGC CGATGCGGTC AGGGCTGCAG TCAAGGCCTG GGGGCTCACG
CTCTTCCCGA CGCTCGACCA GTACCATGCC TACTCGAACA CCGCCACCGC CGTCAGCATA
CCTGACGGGA TGACCGACGA CGACCTTCGC GGACCGGTGA AGAAGATGGG GATCATCATC
GCCGGCGGCC AGGACCACCT GAAGGGGAAG ATCTTCCGGA TTGGGACCAT GGGTGCGGTC
AGCGCCCCCG AGATCCTGGC CACGCTTGCG GCCGTCCAGT ACGCGCTGAA GAAGCACGGC
CTTGAGGTCG GGGACGGTGT CGGTGCTGCC GCCGAGGTGC TGGGATGA
 
Protein sequence
MENEPLLMLP GPVPMPERVR YAMMQQAMNH RSAAFGAVYA DCVKTLKTTF GTTNDLSILS 
GSGTAAMEAA VANFGKGKQI ASLVNGKFGD RLCKIGALYG TSHEIASEWG TPLNLDLLAE
NLENGAEVVT LVHNETSAGI KNPAAEVGKL TRKHDALFIM DGITSIGGDL VEADRWGVDV
AMVGSQKCLA APAGLAAISV SERAWERIAD QRPFYLDLAA YRKNAAKTPM ETPYTPAVPL
FLALREACAI VEEEGLTHRI ARHTRMADAV RAAVKAWGLT LFPTLDQYHA YSNTATAVSI
PDGMTDDDLR GPVKKMGIII AGGQDHLKGK IFRIGTMGAV SAPEILATLA AVQYALKKHG
LEVGDGVGAA AEVLG