| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0306 |
|---|
| Symbol | |
|---|
| ID | 7272607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 336321 |
|---|
| End bp | 336665 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643568956 |
|---|
| Product | Carboxymuconolactone decarboxylase |
|---|
| Protein accession | YP_002465411 |
|---|
| Protein GI | 219850979 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.739579 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAGA AGATGAATGA ACTGGAAGAG AAGATCGGCA AGGTGCCAAA GATCTTCAAG
GATCTCAAGG ATACCAACCC TGACCTGTTT GCAAGTGTGA TGGGTCTGGA CCAGCTGGTC
TGGGCAGATG GTGCGATCTC GCGCCAGCAG AAGAAGTTGA TTGCCATCGC TGTTGCGGCG
GCGATGCGTG ATCAGCATGC TGTTCGGGCA CAACTGGCCG GGGCTGCAAA TCTCGGGGTC
ACCCTCGATC AGATTGAAGA AGCGCTCCGT GTCACGTTCC TGCTCGCGGG GATGCCGGCC
TATGTCTATG GCAGGGCTGC AGCAGAAGAG ATCTGTAAGA AGTAA
|
|---|
| Protein sequence | MDQKMNELEE KIGKVPKIFK DLKDTNPDLF ASVMGLDQLV WADGAISRQQ KKLIAIAVAA
AMRDQHAVRA QLAGAANLGV TLDQIEEALR VTFLLAGMPA YVYGRAAAEE ICKK
|
|---|
| |