| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0296 |
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| Symbol | |
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| ID | 7272597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 329201 |
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| End bp | 329563 |
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| Gene Length | 363 bp |
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| Protein Length | 120 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643568947 |
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| Product | transcription activator effector binding |
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| Protein accession | YP_002465402 |
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| Protein GI | 219850970 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4978] Transcriptional regulator, effector-binding domain/component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.285639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACTCA ACCGGATCCC CATCGGGACA TTCTCGCTGA TCACCCGACT CTCTCAGAAA
GCACTGAGGC TCTATGACGA TCGCGGGTTG CTCGTTCCGG AATCAAAGGA TCGCATCACC
GGATGCGTCG CGGTGACCGA CCCCGCCATC GAGGTCAAGA CGATCCCGGG CGGAAGTCAC
CTGACCCTGG TCTATCAGGG GGCCTATCCC GGATTGCATG AAGCGTGGAG CCGTATCTTT
GTCTATCAGG AAGAGAAGGG ATACAGGATT GCAGGGCCTG GGCGGGAGCT CTACCTGAAC
GATCCTGCCC AGGTGCCAGA AGAAGACCTG CTCACCGAAC TGCACCTGCC GATCATCCCC
TGA
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| Protein sequence | MALNRIPIGT FSLITRLSQK ALRLYDDRGL LVPESKDRIT GCVAVTDPAI EVKTIPGGSH
LTLVYQGAYP GLHEAWSRIF VYQEEKGYRI AGPGRELYLN DPAQVPEEDL LTELHLPIIP
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