| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0186 |
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| Symbol | |
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| ID | 7270957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 216698 |
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| End bp | 217195 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643568841 |
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| Product | 3-isopropylmalate dehydratase, small subunit |
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| Protein accession | YP_002465298 |
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| Protein GI | 219850866 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR02087] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.388139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0344382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGCCT GGAAGTTCGG GGATGACATC GATACCGATG CGATCATCCC GGGACGATAT
CTGATCATCA ATAAACCCGA AGAGCTCGCA TTGCATGCGT TCGAGGGGAC CCGCGACGAG
TTCGCGAAGG AGGTCAAGCC CGGGGATGTT GTGGTCGGGG AGAAGAACTT CGGCTGCGGC
TCCTCGCGTG AGCACGCTCC ACTAGCCCTC AAAGGGGCTG GTGTCCGGTA CGTGATCGCC
ATCACGTTCG CACGGATCTT CTACCGGAAC GCCATCAATG TCGGGTTGCT GCCACTGGTC
TGTCCGGATG CAGCGAAGAT AACAGATAAG GCGGAGATCA GCGTCGACCT GGCGGCCGGC
ACGATCACCG CCGACGGGGT TGCGTACCGG CTTGAACCGG TACCGGCCTT CATGCAGGAG
ATCGTCGATG CCGGCGGTCT CGTCGAATAC GGAAAAAATC TTAAGGAGGT GCAGGTATGT
ACAGAGTCGC ATCAATAG
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| Protein sequence | MKAWKFGDDI DTDAIIPGRY LIINKPEELA LHAFEGTRDE FAKEVKPGDV VVGEKNFGCG
SSREHAPLAL KGAGVRYVIA ITFARIFYRN AINVGLLPLV CPDAAKITDK AEISVDLAAG
TITADGVAYR LEPVPAFMQE IVDAGGLVEY GKNLKEVQVC TESHQ
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