| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0185 |
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| Symbol | |
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| ID | 7270956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 215437 |
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| End bp | 216696 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643568840 |
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| Product | homoaconitate hydratase family protein |
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| Protein accession | YP_002465297 |
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| Protein GI | 219850865 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.576372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0771341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCAA TGGGAGCAAC AATAGCGGAG AAGATATTCT CAACCCGATG CGGAAGGCCG
GTCCACGCAG GTGACGTGGT GATGGCTCCG ATAGATGCAG CGATGATCCA TGATATCACA
GGCCCGCTTG CCATTCAGAC TTTTTACCAG ATGGGTGGCA CCAGGGTTTT TGACCCAAAG
AAGGTGATCA TGCTCTTTGA TCATCAGATC CCTGCAGACT CCATTGCAGC AGCAGGAAAC
CATCAACTGA TGCGAAAGTT TGCAGCAGAA CAGGGGATCC ACAACTATGA CCTCCACGAG
GGGGTCTGCC ATCAGGTGGT TCTTGAAAAG GGAAGGGCTG GGCCTGGTGA GATCGTGGTC
GGGTCCGACT CGCACACCTG CATGTATGGT GCCGCAGGGG CGTTTGCAAC CGGAATAGGG
TCGACCGATA TGGGTTTTGT CCTGAAGTTC GGGGCCCTCT ACTTCCGGGT GCCCGAGACG
ATCAGGATGA CTATCGACGG TGCCTTCCAG CGCCGGGTCG GTCCCAAGGA TCTGATCCTC
TCGATCATCG GGGATATCGG TGCTGACGGG GCCACCTATA AGGCGGTGGA GTTTGCAGGG
TCGACGATCC GGGGGATGGA GATGCCTGGG CGGATGACTC TTTCGAATAT GGCCATCGAG
ATGGGGGGCA AGGCCGGGAT CGTCCCGCCT GATCAGGTGA CCTGGGATTA CCTGAAGTCA
AGGCGGCAGG TCACGCCGTT TGAACTGGAC AGTGACGAGG ACGCGACCTT TGCCGATCAG
CGACGGTATG ATGTGACGAA CCTTGTACCC AAAGTCGCCG TCCCGCACAA CGTGGACCAC
GTGGTCGACG TGACTGAAGT GGCAGGGACG CACCTCGACC AGGTTTTCAT CGGATCGTGC
ACCAACGGGC GGTTCGAGGA TCTTGCAGAG GCCGCGGCCG TCCTCGGCGA TCGGAATTTC
TCCGAGGATC TCCGTGTGCT CGTCATCCCG GCATCAAGGG ATGAATACTT GAAGACGCTG
CGGGCCGGGC TGATCGAGCG GTTCGTCGAG GCCGGGGCGA TGGTCGAGGC GCCGTGCTGC
GGGCCGTGTA TGGGCGGATC GTTCGGGCTG ATCGGCCCGG GCGAGGCTTC TCTCTCCACC
TCGAACCGGA ACTTTAGGGG CCGGCAGGGG TCGGCCGAGG GATCGGTGTA CCTGGCCTCG
GCGGCGACGG CTGCAGCGAG TGCGATCACC GGTGTGATCA CCGATCCGAG GGAGGTGTGA
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| Protein sequence | MNAMGATIAE KIFSTRCGRP VHAGDVVMAP IDAAMIHDIT GPLAIQTFYQ MGGTRVFDPK
KVIMLFDHQI PADSIAAAGN HQLMRKFAAE QGIHNYDLHE GVCHQVVLEK GRAGPGEIVV
GSDSHTCMYG AAGAFATGIG STDMGFVLKF GALYFRVPET IRMTIDGAFQ RRVGPKDLIL
SIIGDIGADG ATYKAVEFAG STIRGMEMPG RMTLSNMAIE MGGKAGIVPP DQVTWDYLKS
RRQVTPFELD SDEDATFADQ RRYDVTNLVP KVAVPHNVDH VVDVTEVAGT HLDQVFIGSC
TNGRFEDLAE AAAVLGDRNF SEDLRVLVIP ASRDEYLKTL RAGLIERFVE AGAMVEAPCC
GPCMGGSFGL IGPGEASLST SNRNFRGRQG SAEGSVYLAS AATAAASAIT GVITDPREV
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