| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0184 |
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| Symbol | |
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| ID | 7270955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 213367 |
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| End bp | 215370 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643568839 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002465296 |
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| Protein GI | 219850864 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1202] Superfamily II helicase, archaea-specific |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.579333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0966259 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATCA TAGTACAACC ACAGCGGGCA GATTACCGGC TGATATTCAC CGATGGGAGA
CATGTCAGAG CGGTCGGTGT GGTCGTGCTG GCAGAGACCC CTAAAGGGAT CCGGCCGAAG
GACTACCGTC TCCGGCGGGC CGGGAGCCGT GAATATCGGA ACACCCCGAG CAAGGAACTG
GTCGCTCTTC TTCGGTCGTC GACGGTCCAC ATGACCAGAA ACGATCAGGC CTTCGGCTCG
TTTCTGCAGG ACATCCAGGT GAAGTGGATG CCGGTCCACT GTTGCCGGCT CTGTCTGCTC
GAGGACAAGG TGACCCCAAT CGATCAGGGG CAGGCGGTGA AGTACGGCAG GGAACTGATC
TGCCTCCCCT GCGCCCGCCG TGAGATGCGG CGCGAACTGG TTCATCTGAA CCACATGGGG
CGTGGAGCCC TCGGCCATCT CGACGACCTG CTCGCCAGGT ACCGGGACCT GGACCGGGTG
ATCGCGACCC TTCTACCTGA CAAGAAGCAG GGTAAACAGA CCCTCTTCGA TCGGATCGAA
GCGCAGCCCA TCCAGCAAAC CACCCGTATT GAGGAACTGC CGCTGCCACG GAAGTTCGTC
GATGTCGCAC AGGTTGAGTC TCTGATGCCG GCGCAGCAGC TGGCTGTCGA GGCCGGACTG
CTCTTTGGTA AGGATCTGCT CGTCGTCTCG GCCACGGCCA GCGGCAAGAC CTTCATCGGG
GAGATGGCCG GGCTGAAAAA CTATCTGGAA GGGCGGGGGA GACTCCTCTT CCTGGTTCCG
CTGGTCGCGC TGGCAACACA GAAGTACAGG CGTTTTTCTG AACGCTACAG GGATATCGCA
CAGACATCGC TGCAGATCGG GCAGTCGAGG ATCCACCTCC GCGAGACGAA GGTTGACGCG
GTGCGCGATC CCCGGTCCCC TATCCTGGTC GGGACGTACG AGGGGGTCGA CCACCAGCTC
CGGCTCGGCC GAAACCTCGG CGATATCGGA ACTGTGGTAA TCGATGAGGT ACAGATGCTC
GAGGATCAGG ATCGGGGCCA CCGGCTTGAC GGTCTGATCG CACGGCTGAA GTACCAGGCC
CCGAACGCCC AATTCCTGTA CCTCTCGGCG ACGATCGGGT CGCCGAAGGT GCTGGCCAAG
AAGTTGAACG CGACGCTGGT CCAGTATGCC GACCGGCCGG TCGCGCTGGA CCGGCACCTG
ATGTTTCTCG AGAAGAAGGA GAAGATCCCG GCGATTAAGC GGTTGATCGA GGAGGAGTAC
AAGAAGATCT CCTCCAAGGG CTACCACGGC CAGTCGATCG TCTTTACCAA CTCCCGGGCT
CGTTGTCATC TGATTGCAGA TAAGGTTGGC AAGCATGTGG CGGCCTACCA TGCCGGGTTG
ACCTCACAGG AGCGGCGGGA GGTGGAGGAT AAGTTCACCC GGGGCAAGCT GGCCGGCGTG
ATCACCACCG CTGCCCTCGG GGCTGGAGTG GACTTTCCCG CCTCACAGGT GGTCTTCGAC
GCCCTTGCCA TGGGGATCTC CTGGTTGAGC GTGCAGGAGT TCAGCCAGAT GTCCGGGCGG
GCCGGCAGAC CCGACTTCCA CGACCAGGGG AGGGTGGTGA TCCTTGCGGA GCCCGGGGCT
ACCTACTCGC GGGAGGCGCA GGGAACTGAG GAGGAGGTGG CGCTCCGGCT GCTGAAGGGT
GAGATGGAGG AGGTCGCGCC CGAGTACGAT CTCGAAGCCT CGTCCGAGGA GTTCGTGGCG
AATGCGATCG TCTGCAGGGG CGATCTTGAG GCGTTACAGC GGATCGAGAG GATGATGGTC
GGGTCCACCG AGCCCGTCCT CGACCTGATG CTCGGCAACC GCCTGATCAA ACGGGAGAAC
GGGAAGATCC AGCTGACCGA TCTCTCGCGG GTGATGGCCT CGCACTTCAT CGGGGTCGAA
CGGCTGCTCG GGATCCTCAA ATTAGTCGAG AAGGTGGACG ACCCGATCGA GATCCTCACC
GAGCTCCACT GCGAAGAAGT GTGA
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| Protein sequence | MIIIVQPQRA DYRLIFTDGR HVRAVGVVVL AETPKGIRPK DYRLRRAGSR EYRNTPSKEL
VALLRSSTVH MTRNDQAFGS FLQDIQVKWM PVHCCRLCLL EDKVTPIDQG QAVKYGRELI
CLPCARREMR RELVHLNHMG RGALGHLDDL LARYRDLDRV IATLLPDKKQ GKQTLFDRIE
AQPIQQTTRI EELPLPRKFV DVAQVESLMP AQQLAVEAGL LFGKDLLVVS ATASGKTFIG
EMAGLKNYLE GRGRLLFLVP LVALATQKYR RFSERYRDIA QTSLQIGQSR IHLRETKVDA
VRDPRSPILV GTYEGVDHQL RLGRNLGDIG TVVIDEVQML EDQDRGHRLD GLIARLKYQA
PNAQFLYLSA TIGSPKVLAK KLNATLVQYA DRPVALDRHL MFLEKKEKIP AIKRLIEEEY
KKISSKGYHG QSIVFTNSRA RCHLIADKVG KHVAAYHAGL TSQERREVED KFTRGKLAGV
ITTAALGAGV DFPASQVVFD ALAMGISWLS VQEFSQMSGR AGRPDFHDQG RVVILAEPGA
TYSREAQGTE EEVALRLLKG EMEEVAPEYD LEASSEEFVA NAIVCRGDLE ALQRIERMMV
GSTEPVLDLM LGNRLIKREN GKIQLTDLSR VMASHFIGVE RLLGILKLVE KVDDPIEILT
ELHCEEV
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