Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0076 |
Symbol | |
ID | 7272246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 80663 |
End bp | 81397 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643568734 |
Product | thymidylate synthase, methanogen type |
Protein accession | YP_002465193 |
Protein GI | 219850761 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0207] Thymidylate synthase |
TIGRFAM ID | [TIGR03283] thymidylate synthase, methanogen type |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.527741 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATCA TCAGCGCCCC GAACCTGGCA CGTGCCCACG AACTGGCAGT GAAGACAGTC CTTGAGAAGG GATGGGTGCT CGGCACCGAG GACGGCGAGG CGACCATCGA GTGTGAGGAA CTGGCTCTGC AGGTGGAGAA CCCGACGACC GAACCGATGA TCAGCACCGG ATCACGGTTC CAGCGACGGT TCATGGAGAA GTACGCTGCC GATCTGCTGC ACGGCTCGGA CGGGATCTTC GAGTATGACT ACCACGGTCG CCTCTTTAAC TGGGGCGACC GGCTCGCCGC GGACGAAGCA CCGGTCCAGG TCGACCAGAT CGCGTATATC ATCAGGAAGT TGCAGGAGGC TCCGGCTACC CGGCGGGCGC TGGCCATCAC CTGGAATCCG GTCGTCGACG AGCAGGTCAA GGACTGTCCG TGTCTGCAGC TGGTCCAGTG CGTGATCAGG GACGGAGCCC TGCAGATGAA GGTGGTCTTC CGCTCCAACG ACATGCTGAC CGCATCAGGG GCCAACATGT TCGCGCTCGT CCACCTGCAG CTGATGATCG CGGAAGCACT CGGGGTCAGG ATCGGGAGGT ACACCCATAT CGCCCTGGTA CCACACGTCT ACTTCACGCG CGACATGGAT GATCTGAAAG CATTCTGCAA CAGGGGAGAG CGTTTCCACC CGGTCCAGGA GGTCTGCTGC CGATGCAGAG GGTGCAATCG GGCAGCCCCA AAGCCGTCAT CTTAA
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Protein sequence | MRIISAPNLA RAHELAVKTV LEKGWVLGTE DGEATIECEE LALQVENPTT EPMISTGSRF QRRFMEKYAA DLLHGSDGIF EYDYHGRLFN WGDRLAADEA PVQVDQIAYI IRKLQEAPAT RRALAITWNP VVDEQVKDCP CLQLVQCVIR DGALQMKVVF RSNDMLTASG ANMFALVHLQ LMIAEALGVR IGRYTHIALV PHVYFTRDMD DLKAFCNRGE RFHPVQEVCC RCRGCNRAAP KPSS
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