| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_7473 |
|---|
| Symbol | |
|---|
| ID | 7303517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 7565296 |
|---|
| End bp | 7566468 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643605027 |
|---|
| Product | secretion protein HlyD family protein |
|---|
| Protein accession | YP_002502513 |
|---|
| Protein GI | 220927211 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCA CCGCCACGGT CGACAGGTTT ACGGCGAGCG GCGAGCCGGT GCTGCCGCAG
GTCGCGTCGC CGCGGGCCTG GAAGCGGCGC CTCATCCCGC TCGCGGCGCT CGCGGCGCTG
CTGGGAGCGG GCCTCTACGG CCGCTACTGG TGGGAGACGG GCCGGTTCCT GGAGACGACG
GACGACGCCT ATGTGGGTGG CGACGTCACG GTGATCGCCA GCAAGGTGCC GGGCTTCGTC
GCCGCGGTCG CGGTCGGCGA CAACCAGCGG ATCCGCGCCG GCGACCTCCT GCTGCGGATC
GACGACCGGG ACTACCGGGC CGCCCTGGCC CGCGCCGAGG CGGCCGTCGC CGGGCAGGAC
GCCGCGCTCG CCAACCTGGA GGCCACGCGC GCGTTGCAGC GGGCCGTGAT CGCGCAGGCC
CGCGCCGACC TCGCCGCCAG CGAAGCCGAG GCCGCCCGGA CGGCCTTCGA TCTCACCCGC
TACCGCCAGC TTTCGGCCAA TCAGTACGCG TCCGAGCAGC GCTTCCAGCA GGCCGAGGCG
GACCACAAGA AGGCCGCCGC CGCCGTCGAG AAGGCGCATG CCACCCTGGA TGCGGCCGAG
CGGCAGCTCG CGGTCATCGA CACGCAGACG CGTCAGGTGC GGGCGGCGCG GGAGCAGGCC
CGGGCGGAGC AGGACATCGC GCGGCTGAAC CTCGGCTATA CCGAGGTCCG GGCTCCCGTC
GATGGCGTGG TCGGCAACCG CAGCGCCCGG ACGGGCTCCT ACGCCACGGT GGGCGCGAGC
CTCGTCTCGC TCGTCCCGGC CGACGGGCTG TGGGTCGACG CGAACTTCAA GGAGAGCCAG
CTCGCCCGGA TGCGGCCGGG CCAGCGCGTC TCGGTGGTCG CGGACGTGTT GCCGGACGAA
ACCTTCAGCG GCCATGTCGA GAGCCTCGCT CCCGCCACCG GCGCTCAGTT CAGCATCCTG
CCGCCCGAGA ACGCCACGGG CAATTTCACC AAGATCGTGC AGCGCGTGCC GGTGCGCATC
CGCCTCGACG GCGAGGGCGC CCGCCTCGGC AAGCTGCGCC CGGGCCTGTC GGTCACCGCC
ACCGTGGACC GGCGCGGCGG GACGGATGCG GCAGAGCCCG CGGACGGCCG CCCCGGGGCG
GCCAGGATGG TCATCGGGGA GGCGACGCGG TGA
|
|---|
| Protein sequence | MSSTATVDRF TASGEPVLPQ VASPRAWKRR LIPLAALAAL LGAGLYGRYW WETGRFLETT
DDAYVGGDVT VIASKVPGFV AAVAVGDNQR IRAGDLLLRI DDRDYRAALA RAEAAVAGQD
AALANLEATR ALQRAVIAQA RADLAASEAE AARTAFDLTR YRQLSANQYA SEQRFQQAEA
DHKKAAAAVE KAHATLDAAE RQLAVIDTQT RQVRAAREQA RAEQDIARLN LGYTEVRAPV
DGVVGNRSAR TGSYATVGAS LVSLVPADGL WVDANFKESQ LARMRPGQRV SVVADVLPDE
TFSGHVESLA PATGAQFSIL PPENATGNFT KIVQRVPVRI RLDGEGARLG KLRPGLSVTA
TVDRRGGTDA AEPADGRPGA ARMVIGEATR
|
|---|
| |