| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_6796 |
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| Symbol | |
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| ID | 7304742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium nodulans ORS 2060 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011894 |
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| Strand | - |
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| Start bp | 6884143 |
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| End bp | 6886140 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643604363 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_002501857 |
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| Protein GI | 220926555 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.180655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCACCGC TCAGCCTTCC CCTCCTCGAT CGCGTCCGTG ATCCGGCGGA TCTCCGCGCC
CTGCCGGAGA GCGACCTGCG CCAGCTCGCG GACGAGTTGC GCGCCGAGAC CATCGACGCG
GTGTCGGTCA CCGGCGGCCA TCTCGGGGCC GGCCTGGGGG TGGTCGAACT CACGGTGGCG
CTGCACTACG TCTTCACCAC CCCCGACGAC CGCCTGATCT GGGATGTCGG CCACCAGGCC
TATCCGCACA AGATCCTGAC CGGCCGGCGC GACCGCATCC GCACCCTGCG CCAGGGCGGC
GGGTTGTCCG GCTTCACCAA GCGGGCCGAG AGCCCCTACG ATCCGTTCGG GGCGGCCCAT
TCCTCCACCT CGATCTCGGC CGGGCTCGGC ATGGCGATCG CCCGCGATCT GGCCGAGGCG
GCGGCGCGCG CCCGCGGCGA GACGCCGGCG CGGCGCAACG TGGTGGCGGT GATCGGCGAC
GGCTCGATCT CGGCCGGCAT GGCCTACGAG GCGATGAACA ATGCCGGGGC GCTGCGCTCG
CGCCTGATCG TGATCCTCAA CGACAACGAC ATGTCGATCG CCCCCCCGGT CGGGGCGATG
TCGGCCTATC TGGCCCGGCT GGTCTCGGGC GACACCTACC GCTCCTTGCG CGACACCGCC
AAGCAGTTCG GCCGGCTGCT GCCCAAGGCC CTCTACGACA CCGCGGCGCG GGCCGAGGAA
TACGCCCGCG GCATCCTGGC GGGCGGCGGC ACCATGTTCG AGGAGCTCGG CTTCCACTAT
GTCGGGCCGA TCGACGGGCA CAATCTCGAC CATCTGCTGC CGGTGCTCAA GAACGTGCGC
GACGCGCCCG AGGGCCCGGT GCTGGTGCAT GTGGTGACCC AGAAGGGCAA GGGCTACGCC
CCGGCGGAAG CCGCCGCCGA CCGCGGCCAC GCGGTGGTGA AGTTCGACGT GCTCTCGGGC
CAGCAGGTGA AGGCCAAGCC GAATGCGCCG AGCTACACCC GGGTGTTCGG GGAGAGCCTG
GTCAAGGCGG CGGCTGCGGA CGAGACGGTG GTGGCGATCA CCGCGGCGAT GCCGTCGGGC
ACCGGGGTGG ATATTTTCGC CAAGGCGCAT CCGGAGCGCA CCTTCGATGT GGGGATCGCC
GAGCAGCACG CGGTGACGTT TGCGGCCGGT CTGGCGGCGG AGGGGTTCCG GCCGTTCTGC
GCGATCTACT CGACCTTCCT GCAGCGGGCC TACGACCAGG TGGTGCACGA CGTGGCGATC
CAGAACCTGC CGGTGCGGTT TGCGCTCGAC CGGGCGGGGC TGGTGGGGGC GGACGGGGCG
ACGCATGCGG GGGCGTTCGA CCTGGCCTAT CTGTGCTGCC TGCCGAACCT GACGGTGATG
GCGGCGGCGG ACGAGGCGGA GCTGGTGCAC ATGGTGGCGA CCGCGCATGC GCATGATGCC
GGCCCGATCG CGTTGCGCTA TCCGCGCGGC GAAGGCGTGG GGGTGGACCT GCCGGAGCGG
GGCGAGGTGC TGGCGATCGG CAAGGGCCGG GTGCTGCGGC GGCCGCCAGG GGCGCGGGTG
GCGCTTCTGA GCCTGGGCAC GCGGCTGGCG GAGGCGCTGA AGGCGGCGGA CCGCCTGGAG
GAGAGCGGGA TCGGGGTGAC GGTGGCGGAT GCGCGCTTTG CCAAGCCGCT GGACGAGGCG
CTGATCCTGG ATCTGGCGGG GAGCCATGAG GTGCTGGTGA CGCTGGAGGA GGGCTCGACC
GGGGGCTTTG GGGCGATGGT GCTGCATCTG CTCGCGGCGC GGGGGGCGCT GGATGCGGGC
ACGGTGCGGG TGCGCACCCT GACGCTGCCG GACGTGTACC AGGACCACGA CAGCCCCGAG
CGCATGTACG CCCAGGCCGG CCTCGACGCG CCTGCCATCG TCCGCACCGT CACCGACCTG
CTGCCCGAGC AGCCGCGCGC GGCGAAGCGC CCGGCCCGCG ACACCAACGT GGTCAGCGTC
TCGCGGCGTC CGCGCTGA
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| Protein sequence | MSPLSLPLLD RVRDPADLRA LPESDLRQLA DELRAETIDA VSVTGGHLGA GLGVVELTVA
LHYVFTTPDD RLIWDVGHQA YPHKILTGRR DRIRTLRQGG GLSGFTKRAE SPYDPFGAAH
SSTSISAGLG MAIARDLAEA AARARGETPA RRNVVAVIGD GSISAGMAYE AMNNAGALRS
RLIVILNDND MSIAPPVGAM SAYLARLVSG DTYRSLRDTA KQFGRLLPKA LYDTAARAEE
YARGILAGGG TMFEELGFHY VGPIDGHNLD HLLPVLKNVR DAPEGPVLVH VVTQKGKGYA
PAEAAADRGH AVVKFDVLSG QQVKAKPNAP SYTRVFGESL VKAAAADETV VAITAAMPSG
TGVDIFAKAH PERTFDVGIA EQHAVTFAAG LAAEGFRPFC AIYSTFLQRA YDQVVHDVAI
QNLPVRFALD RAGLVGADGA THAGAFDLAY LCCLPNLTVM AAADEAELVH MVATAHAHDA
GPIALRYPRG EGVGVDLPER GEVLAIGKGR VLRRPPGARV ALLSLGTRLA EALKAADRLE
ESGIGVTVAD ARFAKPLDEA LILDLAGSHE VLVTLEEGST GGFGAMVLHL LAARGALDAG
TVRVRTLTLP DVYQDHDSPE RMYAQAGLDA PAIVRTVTDL LPEQPRAAKR PARDTNVVSV
SRRPR
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