Gene Mnod_6787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_6787 
Symbol 
ID7304170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp6873587 
End bp6874723 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content72% 
IMG OID643604354 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_002501848 
Protein GI220926546 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTACCG GGCTTCCCCT CGAAGGGCTC GTCGTCGTCG CCATCGAGCA GGCGGTCGCG 
GCGCCGTTCT GCACCGCCCG CCTCGCCGAT GCCGGCGCCC GGGTGATCAA GATCGAGCGG
CCGGAGGGCG ATTTCGCCCG CGGCTACGAC GACGTCGTGG CCGGCCAGCA GAGCAGCTAC
TTCGTCTGGC TCAACCGCGG CAAGGAGAGC CTGGTCCTCG ACCTCGCGAG CGAGACCGGC
AAGCAGAGCT TGCGCGACCT GCTCGGCACG GCGGACGTGC TGGTCCAGAA TCTGAAGCCG
GGCGCGCTCG ACCGACTCGG CTTCGGGATC GAGTCCTTGC GCCGCGAGCA TCCCCGCCTG
ATCGCCTGCT CGATCAACGG CTACGGCGAG TCCGGCCCCC TGGCCGAGCG CAAGGCCTAC
GACCTGCTGA TTCAGGCCGA GTCGGGCCTG TCCTCGATCA CCGGCGGGCC GGAGGAGCCG
GCGCGGGTCG GCATCTCGCT CGTCGACATC GCCACCGGGG CGACCGCCCA TGCGGCGATC
CTGGAGGCGC TGATCGGGCG GTCGATCAGC GGCCGGGGCG CGGCGATCAG CATCTCGATG
TTCGACGTGA TGGCGGACTG GCTGACGGTG CCGCTCCTCC ATCACGAGGG CGGCCGTTCG
CCGAAGCGCA TCGGCCTCGC CCATCCCTCC ATCGCGCCCT ACGGGGTGTT TCGGACCCGC
GAGGGCAAGC CGATCCTGAT CTCGATCCAG AGCGATCGGG AATGGGCCAA GTTCGCCGCC
GAGTTCCTGC GCGATCCGAC GCTCGCGCGC GATCCGCGCT TCGCGACGAA CGTCGCCCGG
GTGGCGAATC GGGCTGAGAC AGACGGGCTG GTGGCGGCGG CCTTCGCGGC GCTCGACGCA
AGTGGGGCCG AGGAGCGCCT GTTGCGGGCC GACGTGGCCT TCGCCTCGGT CAACGACATG
GCCGGCCTCT CGGGCCATCC GCACCTGCGG CGCATCACGG TCGAGACCCC GGCGGGCCCG
GTCTCCTACC CGGCCCCGGC GCCGATCGTC GACGGGCCGC CCCGCACCTA TGGTCCCGTC
CCGGCGCTCG GCGGCAGCCG GGCGGCCGCC GCTGCGGCCC CGCAGGAGGA TGCGTGA
 
Protein sequence
MGTGLPLEGL VVVAIEQAVA APFCTARLAD AGARVIKIER PEGDFARGYD DVVAGQQSSY 
FVWLNRGKES LVLDLASETG KQSLRDLLGT ADVLVQNLKP GALDRLGFGI ESLRREHPRL
IACSINGYGE SGPLAERKAY DLLIQAESGL SSITGGPEEP ARVGISLVDI ATGATAHAAI
LEALIGRSIS GRGAAISISM FDVMADWLTV PLLHHEGGRS PKRIGLAHPS IAPYGVFRTR
EGKPILISIQ SDREWAKFAA EFLRDPTLAR DPRFATNVAR VANRAETDGL VAAAFAALDA
SGAEERLLRA DVAFASVNDM AGLSGHPHLR RITVETPAGP VSYPAPAPIV DGPPRTYGPV
PALGGSRAAA AAAPQEDA