Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_6435 |
Symbol | |
ID | 7305976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | + |
Start bp | 6526088 |
End bp | 6527617 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643604018 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002501519 |
Protein GI | 220926217 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCCTCA AACCTCTGAT TGGCCTGCTC GGCGTGCTCG TTGCCGCCCT CAACGCTCAA TTCAACGAAC TCGTGATGGC CGCGGCCCTG GCCGACGTGC GTGGCGCCTT CGGAATCAGC CACGATCCTG GGCTCTGGAT CGGAAGCGTG TATGCGTCCG GTGTTGTGTT CGGGATGGCC CTTGGCCCCT GGCTCGCCGT TACCTTCACG CTGCGCCGCT TTACCCTGTT CGCCATCGGC CTCGTCTGTG GCACGACGCT GCTCATACCC TTCGCGCCTG ATCTGTCCGT GATGCTGGGC CTGCGCCTGT TTCAAGGTCT GGGCGGAGGC TTCACCATTC CCTTGCTGAT GATGACGGCA TTGCGCGTGC TCACTCCGCC GATCCGTCTC TATGGGCTTG CCATCTACGC GCTCACCGCA ACCTTCTCGC CCGCCATCAG TAGCTCCATC GCAGCACTCT GGACCGATAT CGTCGACTGG CGCTTCGTGT TCTTTGAGGC ACTGCCGCTC GGCGCCTTAG CAGCCGTTCT TGTCTGGCAC GGGCTGCCGC AGGATCATTC GCGCTACGAG CGCTTGCACC AGTTCGACTG GCGAGGCGCC TTGCTCCTAG CTATCGGGGC GGGCACCCTA ACTACGCTGA TGTATCACGG CGACCACAAG GACTGGTTCA ACTCGGAAGA GGTCTGGGTC CTCGTCCTCC TCTGCGCAGT CACTTTCGCG CTGCTCGCGC TCAACGAGTG GCACCACCCG CTCCCCGTGC TCAAGCTGCA GCTGCTCAAG CAGCGGAATT TCGCCTACGG GGTGCTTGGG CTGTTCCTCT TCGTCGTCCT TAGTCTGTCA TCGTCACTGG TGCCGCAGAC GTATTTGGTT GAAATCCAGG GCTATCGTGC CCTGCAGGGG CACTGGATCA CGCTCCTTAT TGCGCTCGGG CAGTTCCTGA TGCTGCCAGC AGTGGCGTTC TTGCTCGATC ATCGGTGGGC TGATGCCCGC ATAGTGACAC TGTTCGGGTT GGCACTCATT GGCATGGCCT GCCTTGGAAA TGCTGCGCTC GACGCCTCTT GGAACCGGGA GCAGTTCTAT CTCTGGCAAG CTCTGCAGGC GGTCGGTCAG CCAATGGTCG TCTTGCCTCT GCTGATGATG GCAACGAACA CTGTGAAGGG ACCGGAGGAA GGTCCGTTCG CCTCAGCGCT AGTCAACGCG ACCCGCAGCC TAGCCGCACC AGTTGGCATC GGCATTCTGG AATTCATCGA GCGGTGGCGC GGCGCACTCC ATTCTGAGCG TCTCGTTGAG CAAGTCGGAC AGACCCGCTT CCAGCCGATG TTCGCTCCCA ACAGCCTGCT GCCCGGTAGC TCACCCGCTG TGAGCGAGCA GGGGGAGCGG CTCGCCCGTG CCGTAGTGGC CCAAGCGAAC GTGCTGACGG CCGCAGACAC TTTCCTGATC CTGGCCGCGT TCGGCGTCGC TCTCGCGCTG CTCGTCGTGT TGCTGCCCGT CCGCACCTAC CCGCCGCGCA TCCTGTTCGC GAGGGGCTGA
|
Protein sequence | MALKPLIGLL GVLVAALNAQ FNELVMAAAL ADVRGAFGIS HDPGLWIGSV YASGVVFGMA LGPWLAVTFT LRRFTLFAIG LVCGTTLLIP FAPDLSVMLG LRLFQGLGGG FTIPLLMMTA LRVLTPPIRL YGLAIYALTA TFSPAISSSI AALWTDIVDW RFVFFEALPL GALAAVLVWH GLPQDHSRYE RLHQFDWRGA LLLAIGAGTL TTLMYHGDHK DWFNSEEVWV LVLLCAVTFA LLALNEWHHP LPVLKLQLLK QRNFAYGVLG LFLFVVLSLS SSLVPQTYLV EIQGYRALQG HWITLLIALG QFLMLPAVAF LLDHRWADAR IVTLFGLALI GMACLGNAAL DASWNREQFY LWQALQAVGQ PMVVLPLLMM ATNTVKGPEE GPFASALVNA TRSLAAPVGI GILEFIERWR GALHSERLVE QVGQTRFQPM FAPNSLLPGS SPAVSEQGER LARAVVAQAN VLTAADTFLI LAAFGVALAL LVVLLPVRTY PPRILFARG
|
| |