| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_6372 |
|---|
| Symbol | |
|---|
| ID | 7301577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 6477947 |
|---|
| End bp | 6479749 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643603958 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_002501461 |
|---|
| Protein GI | 220926159 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGCC TTGCTGCCGG GAAGAAGCCC GGTGCCGGGA AGAAGCCCGG TGCCGGGAAG
AAGCCCGGTG CCGGGAAGAA GCCCGGTGCC GGGAAGAAGC CCGGCGCCGG GGAGCGCCCC
GGCCGCGCCG CCGGGGCCTT CGCCGACCGG CTGCTGTCGC TCGGCGCCCG CAGCCATGCC
GCGGCCTGCG GGCTCCTCGT CCTCCTCTGC CTCGCCTGCT TCCTGCCGGG CTTCGCCTCG
CTCCAGCCGA TGGACCGGGA CGAGCCGCGC TTCGCGCAGG CCTCCAAGCA GATGCTGGAA
ACCGGCGACC TCGTCGACAT CCGCTTCCAG GGCGAGGCCC GGCACAAGAA GCCGGTCGGG
ATCTACTGGG CGCAGAGCGC CGTGGTGGGG GCCGCTGAGG CGCTCGGCGT GAAGCAGGCC
CGCACCACCA TCGCCCTCTA CCGCATCCCC TCGCTCTTCG GTGCGGTCGC CGCCGTGCTG
CTGACCTACT GGGCCGCGCT CGCCTTCCTG CCGCGGCGCC ACGCCTTCCT GGCCGCGGCG
TTGTTCGGGG CCTGCGCGAT GCTCTCGGCC GAGGCGCGGC TCGCCAAGAC GGACGCGCTC
CTCGCCGCCA CGGCCGTGGC GGCCATGGGG GGGCTCGCCC GCGCCTGGCT GCGCGGCCGG
GCCGGGCGCC TGCCGGGCGG CACCGTGCTG GCGTTCTGGC TCGCCGTCGC CCTCGGCATC
CTGATCAAGG GGCCGATGGT GCCGCTCTTC GCGGGGCTCG CCGCCCTCGC GCTCTCGGTC
AAGGCGCGGT CGGGGGCGTG GCTCCGCTCC TTGCGCCCGG GGCTCGGGCT CCTCATCGTG
CTTGCCGTCG CGGCACCCTG GTTCGTCGCC ATCGCGGTCA AGAGCGGTGG CGCCTTCTTC
GGCGAGGCAG TGGGGCACGA CATGCTGGGC AAGGTCGGCA CGGCCCAGAC CCAGCATTGG
GCGCCCCCGG GCACCTACCT GCTCGTCATC TTCGGGACCT TCTGGCCCGC CGCCGCCTTC
GCCGCCATGG CCGTCCCCTT CGCCTGGCAG GCCCGGCGCG AGGATGCGGT CGCCTTCCTG
ATCGCCTGGG TGGTGCCCGC CTGGCTCGTC TTCGAGGCGG TGCCGACGAA GCTGCCCCAC
TACGTGCTGC CCCTCTGCCC GGCGCTGGCG ATCCTGGCCG TGATGGCGGT CGCCCGCGGG
GCGGTGCATC GCGGCCGGCC GGGTGCGCGG CTGGTGGCCC TCCTGGTCCC GCTCGTGCCC
CTCGGCCTGA CCATCGGCCT CTGCGCCGCG GCCTGGCGGC TCGACGGGGT GCTCCCGGTG
GCCGGGCTGC CGCTCCTCGT CGCCGCGACC CTGGTCGCCG CCGCGGCCTG GCACCTCTTC
GCGGCCGGGT TTACCGAGCG CGCCCTGGCG GTGTCGGTCC TCGCCGCGAT GCTGCTCAGC
CCCGCCGTGT TCGGGCTGAC CCAGCCGGTC CTGGCCTCCC TCAAGGTCTC GCCGCGGCTC
GCCGCCCTGC GGGCGGAGCT CCCCTGCGCC CCCGCGGAGG TGGCGACGCT GGGCTACCGT
GAGCCGAGCC TCGTCTTCCT CACCGGCACC GACCTCGCGA TGCTCGATTC CGGCGACGAG
GCGGCCGCGT TCCTGGCCGC GGGCGGCTGC CGCCTCCTCT ACGTGGAGGA CCGCTTCCGC
GAGCCCGTCC GGGCCGCCCT CGCCGCGCGG GACCTGCATC CCCGGACGAT CGGACGCGTC
GCGGGCTTCA ACATCAACGG CGGCAAGCCG GTCGGGCTCG ACGCCTACGC GGTGACGCCG
TGA
|
|---|
| Protein sequence | MTSLAAGKKP GAGKKPGAGK KPGAGKKPGA GKKPGAGERP GRAAGAFADR LLSLGARSHA
AACGLLVLLC LACFLPGFAS LQPMDRDEPR FAQASKQMLE TGDLVDIRFQ GEARHKKPVG
IYWAQSAVVG AAEALGVKQA RTTIALYRIP SLFGAVAAVL LTYWAALAFL PRRHAFLAAA
LFGACAMLSA EARLAKTDAL LAATAVAAMG GLARAWLRGR AGRLPGGTVL AFWLAVALGI
LIKGPMVPLF AGLAALALSV KARSGAWLRS LRPGLGLLIV LAVAAPWFVA IAVKSGGAFF
GEAVGHDMLG KVGTAQTQHW APPGTYLLVI FGTFWPAAAF AAMAVPFAWQ ARREDAVAFL
IAWVVPAWLV FEAVPTKLPH YVLPLCPALA ILAVMAVARG AVHRGRPGAR LVALLVPLVP
LGLTIGLCAA AWRLDGVLPV AGLPLLVAAT LVAAAAWHLF AAGFTERALA VSVLAAMLLS
PAVFGLTQPV LASLKVSPRL AALRAELPCA PAEVATLGYR EPSLVFLTGT DLAMLDSGDE
AAAFLAAGGC RLLYVEDRFR EPVRAALAAR DLHPRTIGRV AGFNINGGKP VGLDAYAVTP
|
|---|
| |