| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_6078 |
|---|
| Symbol | |
|---|
| ID | 7305572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 6191914 |
|---|
| End bp | 6193524 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643603699 |
|---|
| Product | acyl-CoA synthetase |
|---|
| Protein accession | YP_002501206 |
|---|
| Protein GI | 220925904 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCGA TGTCCCGCCG GGTGATGAAC CTCGCCCATA GCCTGACGCA GGCGGCGCAG
CGGCACCCCG ATCGGACAGC CATCGTCTGG GGCGAGCGGA ACTGGACCTG GGCCGCCTTC
GACGCCCGGG TGTCGCGCCT CGCCGCCGCG CTCGCCGCCC GCGGCATCGC CAAGGGCGAC
CGGCTCCTCG TGCATGCCCG CAACGGCAAT CCGATTCTGG AGATCATGTA CGCGGCCTTC
CGGCTCGGGG CCGTGTTCGT GCCGACGAAC CACCGCCTGA TGCCGGGCGA CGTCGCCTAT
CTGGCCGAGC AGTCGGGTGC CCGCGCCTTT CTGTGCCAGG CGGACAATCC GGGCCATGTC
GCGGCCGTGA CGGCCGCCTG CCCGGAGGTG AGCCTCGTCG TCACCCTCGG AGAGGGCACG
GCGGAGGGCA TCCCCTACGA GGCGATGCTC GCGGAGGCGC CGGACGGCCG CGTGCCGAAC
GCCGCCGTCG AGCACGACGA TCCCTGCTGG TTCTTCTACA CCTCGGGCAC GACCGGCAAG
CCCAAGGCCG CCGTGCTCAC CCACGGCCAG ATGGCTTTCG TGATCACCAA CCACCTCTGC
GACCTGATGC CGGGGACGAT TCCGGAGAGC GACGTCTCCC TGGTGGTGGC GCCGCTCTCG
CACGGGGCGG GCATCCATGC GCTCACGCAG GTCGCCCGCG CGGTGACGAG TGTGCTGCCG
GCCAGCGACC GCTTCGACGG CGCCGAAGTC TGGCGCCTGA TCGAGCAGCA CCGGGTGACG
AACATGTTCA CGGTTCCGAC CATCCTGAAG ATGATGGTCG AGCACCCGGC CGTGGCCGCG
CACGACCACG CCTCCCTGCG CTACGTGATC TATGCGGGCG CGCCAATGTA CCGGGAGGAC
CAGAAGCGGG CGCTCAAGAC CCTCGGTCCC GTGCTGGTGC AGTATTTCGG GCTCGGCGAG
GTGACGGGCA ACATCACGGT GCTGCCGCCC CACCTGCACG ATGCCGAGGA CGGGCCGGGG
GTGCGCATCG GCACCTGCGG CATCGAGCGC ACCGGCATGG AGGTGCAGAT CCAGGACGCG
GAGGGCCGCG AGGTCCCGCC CGGCGAGACC GGCGAGATCT GCGTCTGCGG CCCCGCCGTC
TTCGCCGGAT ACTGGAACAA CTCCAAGGCC GATGCGGAGG CGTTTCGCGA CGGCTGGTTC
CGCACCGGCG ATCTCGGCTT CCTCGATGCG GAGCGGTTCC TGACCATCAC GGGCCGCGCC
TCCGACATGT ACATCTCGGG CGGCTCGAAC ATCTATCCGC GGGAGATCGA GGAGAAGATC
CTGGCCCATC CGGCCGTGGC CGAGACGGCG GTGCTCGGCG TGCCCGATCC GACCTGGGGC
GAGATCGGCA TCGCGGTCTG CGTGCCCCGC GAGGGCGCGG CGCTCACCGA GGCCGAACTC
CTCGCCTTCC TCGACGGGAG AATCGCCCGC TACAAGCTGC CCAAGCGCGT CTTTCTGCGC
CCTGCCCTGC CGAAATCCGG CTACGGCAAG ATCACCAAGA AGCTGGTGCG CGAGGAGCTG
GAGGCGGCGG GCCTCCTGCC CCTCGACGGG CGGCCGAGCC ATGCGGCCTG A
|
|---|
| Protein sequence | MTPMSRRVMN LAHSLTQAAQ RHPDRTAIVW GERNWTWAAF DARVSRLAAA LAARGIAKGD
RLLVHARNGN PILEIMYAAF RLGAVFVPTN HRLMPGDVAY LAEQSGARAF LCQADNPGHV
AAVTAACPEV SLVVTLGEGT AEGIPYEAML AEAPDGRVPN AAVEHDDPCW FFYTSGTTGK
PKAAVLTHGQ MAFVITNHLC DLMPGTIPES DVSLVVAPLS HGAGIHALTQ VARAVTSVLP
ASDRFDGAEV WRLIEQHRVT NMFTVPTILK MMVEHPAVAA HDHASLRYVI YAGAPMYRED
QKRALKTLGP VLVQYFGLGE VTGNITVLPP HLHDAEDGPG VRIGTCGIER TGMEVQIQDA
EGREVPPGET GEICVCGPAV FAGYWNNSKA DAEAFRDGWF RTGDLGFLDA ERFLTITGRA
SDMYISGGSN IYPREIEEKI LAHPAVAETA VLGVPDPTWG EIGIAVCVPR EGAALTEAEL
LAFLDGRIAR YKLPKRVFLR PALPKSGYGK ITKKLVREEL EAAGLLPLDG RPSHAA
|
|---|
| |