Gene Mnod_6048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_6048 
Symbol 
ID7305542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp6157213 
End bp6158427 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content74% 
IMG OID643603669 
Productcell wall hydrolase/autolysin 
Protein accessionYP_002501176 
Protein GI220925874 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.795941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCCG CGTGGCTGTG CTTCGCGCTC GTCCCCGCGC GGGCCGGGGA CGCGCCCGCG 
GTCGCCATCG CGGCCGAGAT CTCGGCCGGG CCGGAAGGCG GCACGCGGCT CAGCGTGGTG
CTGTCGCGCC CCGTCGAGGC CAGGGCCTTC GTGATGGAGC GGCCGGACCG CGCCATCGTC
GACCTGCCGG AGGTGAATTT CCAGCTGCCT CCCGAGACGG GCCGGCGCCG CGAAGGGCTC
GTCGCCTCCT TCCGCTACGG CCTGTTCGCC CCGGGCCGCT CGCGCATCGT CATCGACCTC
GCCCAGACCG CGACCGTGGC GCGGGTGGCG ACCGCGCCGC GCCAGCGGGA CGGCGCGACG
CTCCTCACCA TCGACCTCGC CCGCACCGAC CGCGACAGCT TCCGCCGCGC CGCCGTCGCC
CCCGAGCCGC CCGCCGCTTC GAAAGCCGTG CCGGCGAATC CGGGCGACAC CCGCCCGCTC
GTCATCGTCG ATGCGGGCCA TGGCGGCACG GATCCGGGCG CGATCGCGGC GAACGGCGCC
TTCGAGAAGG ATATCGTGTT CGGGGTCGCC CGCGACCTGG CGCGGCGCCT GGAACAGGGC
GGCCGCGTGC GGGTGCGGAT GACCCGCGAG GGCGACGTCT TCGTGCCGCT GGCCGAGCGG
GTGCGCATCG CCCGCGAGGC GAAGGCGGAC CTGTTCGTGT CGATCCATGC GGATTCGATC
TCGGCCGCCC CGCAGGTGCG CGGCGCCACC ATCTACACGG GCTCCGAGAA GGCCACCGAC
GCGGAATCGG CCCGCCTCGC CGAGCGCGAG AACAAGGCCG ACCAGGCGGC CGGCGCCGAC
AGCGCCGAGG GGCCGGGCGA TGTCGCCGAC ATCCTGCAGG AACTCACGCT GCGGGAGACC
CGCAGCTTCT CGGCCCGCTT CGCCCACGGG CTGCTCGGCC AGCTCGACCG GGTGATGGAG
ATGAGCGCCA AGCCCCACCG CGAGGCGGGG TTCAGGGTGC TGCGCTCCCC CGACGTGCCC
TCGGTCCTCG TCGAGCTCGG CTATCTGTCG AGCAAGCACG ACCTCGACCT CCTGCTCTCG
GAGGAGTGGC GGAGCAGGGT CACCGCCCGG ATGGCGGAGG CGGTCGAGAC CTTCTTCGCC
GGCCGGGTCG CCCCGGGCTT CGGTCCGGCC TTCGCCCGCC GGTCCGCGGC GATGACCGCC
CCAGTTTCAC CATAG
 
Protein sequence
MAAAWLCFAL VPARAGDAPA VAIAAEISAG PEGGTRLSVV LSRPVEARAF VMERPDRAIV 
DLPEVNFQLP PETGRRREGL VASFRYGLFA PGRSRIVIDL AQTATVARVA TAPRQRDGAT
LLTIDLARTD RDSFRRAAVA PEPPAASKAV PANPGDTRPL VIVDAGHGGT DPGAIAANGA
FEKDIVFGVA RDLARRLEQG GRVRVRMTRE GDVFVPLAER VRIAREAKAD LFVSIHADSI
SAAPQVRGAT IYTGSEKATD AESARLAERE NKADQAAGAD SAEGPGDVAD ILQELTLRET
RSFSARFAHG LLGQLDRVME MSAKPHREAG FRVLRSPDVP SVLVELGYLS SKHDLDLLLS
EEWRSRVTAR MAEAVETFFA GRVAPGFGPA FARRSAAMTA PVSP