26 homologs were found in PanDaTox collection
for query gene Mnod_6002 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011894  Mnod_6002  Methylene-tetrahydromethanopterin dehydrogenase  100 
 
 
297 aa  588  1e-167  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_5778  methylene-tetrahydromethanopterin dehydrogenase  91.92 
 
 
297 aa  512  1e-144  Methylobacterium sp. 4-46  Bacteria  normal  0.618077  normal 
 
 
-
 
NC_011757  Mchl_2164  Methylene-tetrahydromethanopterin dehydrogenase  80.81 
 
 
297 aa  448  1e-125  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0602967  normal  0.200287 
 
 
-
 
NC_010172  Mext_1829  methylene-tetrahydromethanopterin dehydrogenase  80.81 
 
 
297 aa  448  1e-125  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1780  Methylene-tetrahydromethanopterin dehydrogenase  81.14 
 
 
297 aa  446  1.0000000000000001e-124  Methylobacterium populi BJ001  Bacteria  normal  0.0681451  normal 
 
 
-
 
NC_010505  Mrad2831_0528  methylene-tetrahydromethanopterin dehydrogenase  79.8 
 
 
297 aa  439  9.999999999999999e-123  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.82128 
 
 
-
 
NC_011666  Msil_2385  Methylenetetrahydrofolate dehydrogenase (NADP(+))  54.58 
 
 
295 aa  320  9.999999999999999e-87  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008825  Mpe_A2607  methylene tetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase, putative  48.8 
 
 
300 aa  255  8e-67  Methylibium petroleiphilum PM1  Bacteria  normal  0.0254365  normal 
 
 
-
 
NC_010625  Bphy_6482  methylene-tetrahydromethanopterin dehydrogenase  45.83 
 
 
308 aa  248  9e-65  Burkholderia phymatum STM815  Bacteria  normal  normal  0.428861 
 
 
-
 
NC_012791  Vapar_3084  Methylenetetrahydrofolate dehydrogenase (NADP(+))  48.15 
 
 
305 aa  245  4.9999999999999997e-64  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3152  methylenetetrahydrofolate dehydrogenase (NADP(+))  48.96 
 
 
303 aa  245  6e-64  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007952  Bxe_B2431  methylene-tetrahydromethanopterin dehydrogenase(NAD+/NADP+) (mtdB)  45.95 
 
 
313 aa  241  1e-62  Burkholderia xenovorans LB400  Bacteria  normal  0.145051  normal 
 
 
-
 
NC_007947  Mfla_1660  methylene tetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase, putative  46.21 
 
 
299 aa  232  6e-60  Methylobacillus flagellatus KT  Bacteria  normal  0.028251  normal  0.670151 
 
 
-
 
NC_009720  Xaut_1787  methylene-tetrahydromethanopterin dehydrogenase  48.66 
 
 
297 aa  229  6e-59  Xanthobacter autotrophicus Py2  Bacteria  normal  0.322535  normal  0.634853 
 
 
-
 
NC_010625  Bphy_5948  methylenetetrahydrofolate dehydrogenase (NADP(+))  46.04 
 
 
291 aa  228  7e-59  Burkholderia phymatum STM815  Bacteria  normal  0.620431  hitchhiker  0.00520062 
 
 
-
 
NC_002977  MCA3018  methylene tetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase, putative  45.48 
 
 
301 aa  225  7e-58  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA3019  methylene tetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase, putative  42.76 
 
 
293 aa  206  3e-52  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A3259  methylenetetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase  36.49 
 
 
286 aa  125  1e-27  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2133  Methylenetetrahydrofolate dehydrogenase (NADP(+))  30.07 
 
 
288 aa  116  6e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.297933 
 
 
-
 
NC_010172  Mext_1797  methylenetetrahydrofolate dehydrogenase (NADP(+))  29.73 
 
 
288 aa  115  7.999999999999999e-25  Methylobacterium extorquens PA1  Bacteria  normal  0.840906  normal  0.369167 
 
 
-
 
NC_010725  Mpop_1749  Methylenetetrahydrofolate dehydrogenase (NADP(+))  30.07 
 
 
288 aa  114  2.0000000000000002e-24  Methylobacterium populi BJ001  Bacteria  normal  0.32958  normal  0.767323 
 
 
-
 
NC_010511  M446_6554  methylenetetrahydrofolate dehydrogenase (NADP(+))  32.11 
 
 
287 aa  114  3e-24  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0995051 
 
 
-
 
NC_002977  MCA0508  methylenetetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase  33.94 
 
 
286 aa  110  4.0000000000000004e-23  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3668  methylenetetrahydrofolate dehydrogenase (NADP(+))  29.05 
 
 
287 aa  107  3e-22  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.222101  normal  0.39273 
 
 
-
 
NC_011894  Mnod_7114  Methylene-tetrahydromethanopterin dehydrogenase  31.67 
 
 
286 aa  102  8e-21  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0631744  n/a   
 
 
-
 
NC_014148  Plim_3754  Methylenetetrahydrofolate dehydrogenase (NADP(+))  31.21 
 
 
288 aa  89.7  5e-17  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
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