Gene Mnod_5508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5508 
Symbol 
ID7306935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5617254 
End bp5618165 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content74% 
IMG OID643603140 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_002500655 
Protein GI220925353 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGAG CAATCCTGAT TCTGGGCGGT GGCGGCCAGG TCGGCACCGA GCTGCAGCTT 
CACGCCTGGC CGGCGGACGT GGCGATCCAC GCCCCCGCCC GCGAGGCCCT CGACATCACC
GACGAGACGG CGGTTGCGGC CGCGCTTACC GAGCGCTCCT ATGCGGCGGT GATCAACACC
GCCGCCTACA CGGCAGTGGA CAAGGCCGAG AGCGAGATCG GGGCGGCGTG GCGCCTCAAC
GCGCTGGCCC CGGCTTATCT CGCCGCCGCC ACCGCACGGG CGGGCATCCC GCTCGTGCAG
GTCTCGACGG ATTACGTCTT CGACGGGACC GGCGCGGGCG CCTACCTGCC CGAGGCGCCG
GTGCAGCCGA CCAGCGTGTA CGGGGCCAGC AAGGCGGCCG GCGAGCTGGC GGTGCGCACC
GGCAACCCGC GCCACGCGGT GGTGCGCACC GCCTGGGTGG TCAGCCCGCA CCGGGGCAAC
TTCGTCAAGA CGATGCTGCG GCTCGCCGGC GAGCGCGACG GCCTCAGGGT GGTGGACGAC
CAGCGGGGCT GCCCGACCGC CGCCGCCGAT CTCGCGGCGG CGCTGGCCAC GATTGCGCTG
CGGCTCGCCG AGGATCCGGC GGCGCCGACC GGCACCTATC ATTGCGTCAA TGCGGGTGCC
ACTACCTGGT GCGGCTTCGC CCGGGCCATC ATGGCGGGCG CGCAGGCCCG CGGCGCCCGC
GCGGTGCCGG TGGAGCCGAT CCCGAGTTCG GCCTTTCCGA CCCCTGCCCG GCGCCCGGCC
AATTCCGAGC TGTCGACCGC CTCGCTCACG CGCGACTTCG GCATCGTGCC GCGGCCCTGG
CCGGCGGCGC TCGACGACAT TCTCGATCGC TTGATCGGCC CGGTGACGCC GGCCTCCAGG
AGACCATCAT GA
 
Protein sequence
MSRAILILGG GGQVGTELQL HAWPADVAIH APAREALDIT DETAVAAALT ERSYAAVINT 
AAYTAVDKAE SEIGAAWRLN ALAPAYLAAA TARAGIPLVQ VSTDYVFDGT GAGAYLPEAP
VQPTSVYGAS KAAGELAVRT GNPRHAVVRT AWVVSPHRGN FVKTMLRLAG ERDGLRVVDD
QRGCPTAAAD LAAALATIAL RLAEDPAAPT GTYHCVNAGA TTWCGFARAI MAGAQARGAR
AVPVEPIPSS AFPTPARRPA NSELSTASLT RDFGIVPRPW PAALDDILDR LIGPVTPASR
RPS