Gene Mnod_5360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5360 
Symbol 
ID7301949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5438790 
End bp5439359 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content75% 
IMG OID643602992 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002500508 
Protein GI220925206 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATCG AATCCAAACT CTCGGCCGCG ATGGCGGCGG CACAGGACGG CGATGCCGCC 
GCCTATCGCG CGCTCCTGCG CGACTGCGTG CCGGTGATCG CCGCCCTGGC CCGCGCCCAA
GGGGTGCGGT CGGAGGCGGT CGACGACGTG GTGCAGGAGA CGCTGCTGAC CGTTCACCGG
GCGCGGGCCA CCTACGATCC CGCCCGGCCG TTCCTGCCCT GGCTGCGCGC CATCGCCCAG
CGCCGGGCCG TCGACCTCCT GCGCCGCGCG AGCCGGCGCC CGCAGGAGGT GCATGATCCG
CTCGCCTACG AGGCCGAGAC GGATGCCGGT CCGCTGCCGG GCGAGGGGAT CGAGCGGCGC
CAGCGCGCCA CGCATCTCGC CCGGGCGGTG GCGGCGCTGC CCGAAGGCCA GCGGCAGGCA
GTGGAGCAGC TCTCGCTGCG CGAGCGTTCC CTCGAGGAGG CGGCGCTCGC GACGGGCCGC
AGCAAGGGTG CCCTGAAGGT CAACCTGCAC CGGGCGCTGA AGAGCTTGCG CACCGCGCTC
GCGGGCGACA GGGAGAGCGG CCATGTCTGA
 
Protein sequence
MEIESKLSAA MAAAQDGDAA AYRALLRDCV PVIAALARAQ GVRSEAVDDV VQETLLTVHR 
ARATYDPARP FLPWLRAIAQ RRAVDLLRRA SRRPQEVHDP LAYEAETDAG PLPGEGIERR
QRATHLARAV AALPEGQRQA VEQLSLRERS LEEAALATGR SKGALKVNLH RALKSLRTAL
AGDRESGHV