Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_5360 |
Symbol | |
ID | 7301949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 5438790 |
End bp | 5439359 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643602992 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002500508 |
Protein GI | 220925206 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGATCG AATCCAAACT CTCGGCCGCG ATGGCGGCGG CACAGGACGG CGATGCCGCC GCCTATCGCG CGCTCCTGCG CGACTGCGTG CCGGTGATCG CCGCCCTGGC CCGCGCCCAA GGGGTGCGGT CGGAGGCGGT CGACGACGTG GTGCAGGAGA CGCTGCTGAC CGTTCACCGG GCGCGGGCCA CCTACGATCC CGCCCGGCCG TTCCTGCCCT GGCTGCGCGC CATCGCCCAG CGCCGGGCCG TCGACCTCCT GCGCCGCGCG AGCCGGCGCC CGCAGGAGGT GCATGATCCG CTCGCCTACG AGGCCGAGAC GGATGCCGGT CCGCTGCCGG GCGAGGGGAT CGAGCGGCGC CAGCGCGCCA CGCATCTCGC CCGGGCGGTG GCGGCGCTGC CCGAAGGCCA GCGGCAGGCA GTGGAGCAGC TCTCGCTGCG CGAGCGTTCC CTCGAGGAGG CGGCGCTCGC GACGGGCCGC AGCAAGGGTG CCCTGAAGGT CAACCTGCAC CGGGCGCTGA AGAGCTTGCG CACCGCGCTC GCGGGCGACA GGGAGAGCGG CCATGTCTGA
|
Protein sequence | MEIESKLSAA MAAAQDGDAA AYRALLRDCV PVIAALARAQ GVRSEAVDDV VQETLLTVHR ARATYDPARP FLPWLRAIAQ RRAVDLLRRA SRRPQEVHDP LAYEAETDAG PLPGEGIERR QRATHLARAV AALPEGQRQA VEQLSLRERS LEEAALATGR SKGALKVNLH RALKSLRTAL AGDRESGHV
|
| |