Gene Mnod_4653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_4653 
Symbol 
ID7305812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp4725219 
End bp4726001 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content71% 
IMG OID643602297 
ProductXylose isomerase domain protein TIM barrel 
Protein accessionYP_002499823 
Protein GI220924521 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3622] Hydroxypyruvate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0700232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGCT TTGCCGCCAA TCTCACGCTG ATGTTCACCG AGCACCCGTT CCTCGACCGC 
TTCGCGGCGG CCGCGGAGGC CGGGTTCGCG GCGGTGGAGT TCCTGTTCCC CTACGAGCAT
CCGCCACAGG CCATCGGCGA GCGCCTGCGC CGCCACGGCC TGACGCAGGC CCTGTTCAAC
CTGCCGCCCG GCGACTGGGC GGTGGGCGAG CGCGGCCTCG CGGCCCTGCC CGACCGGTTC
GACGAGCTGA AGGCGGGCGT CGAGACCGCG CTCGCCTACG CGGCCGAGAC GGGCGTGCGG
CGCCTCCACC TGATGGCCGG CATGGCCGAC CGGGCGGATC CGGCTGCCCG GGACGCCTAT
CGCCGCGCGG TCGCCTGGAC CGCCGAGCGG CTCGCGCGGG AAGAGCTCGA CCTGCTCCTC
GAGCCGATCA ACGGCCGCAA CATGCCGGGC TATTTCCTGA ACGACTTCGG CGCCGCCGCG
GATCTCATCC GCGAGCTTGC CCTGCCGAAC CTGAAGCTGC AGTTCGACCT CTACCACTGC
CAGATCCTGC ATGGCGACGT GACCATGCGG CTGCGCGCCC TGATGCCGAT GATCGGGCAT
GTCCAGACCG CGAGCGTCCC CGACCGCCAC GAGCCCGGAA CCGGCGAGAT GAACGACGCC
TTCCTGTTCG CGGAACTCGA CCGGCTCGGC TATGACGGCT TCGTCGGCTG CGAGTACAAC
CCGAAGGCCG GGACGCAAGC CGGCCTCGGC TGGTTCGCGC CCTTCCGGGG AGGCCGGTCA
TGA
 
Protein sequence
MPRFAANLTL MFTEHPFLDR FAAAAEAGFA AVEFLFPYEH PPQAIGERLR RHGLTQALFN 
LPPGDWAVGE RGLAALPDRF DELKAGVETA LAYAAETGVR RLHLMAGMAD RADPAARDAY
RRAVAWTAER LAREELDLLL EPINGRNMPG YFLNDFGAAA DLIRELALPN LKLQFDLYHC
QILHGDVTMR LRALMPMIGH VQTASVPDRH EPGTGEMNDA FLFAELDRLG YDGFVGCEYN
PKAGTQAGLG WFAPFRGGRS